Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00232 ATGATGATAAAAAACCAATCTCTATTATTCTTCACAATAACACTGCTAATTTCCACAACCACTATAGCACAATTATCACCATCTATATCCCCAGTAGTTCAACCAAACCCTAAACCAACAACAACACCAGCAGCATCACCAAAACCATTGGTACCTTCATTACCAAGCAACTCACCAAGTGAGAACATTCCAGACACACCCACTGTTGATGTCATCGCCATTCTGAGGCAAGCAAAGTCATTCAACACACTCATCAGACTCATGAAGATCACCCAATTGATCAACCAACTTAACTCTCAGCTCATCACTTCCAAGTCCGGCGGCCTCACCATCCTTGCCCCCGACGACGCCGCCTTCTCCCAACTCAAACCCGGCTTCCTCAACTCTCTTTCCGATGGACAGAAGCTTGAACTCGTGCAGTTCCACGTCATCTCCGACTACGTTTCGAGTTCCAACTTTGACACACTCACAAACCCGGTCAGGACACTGGCCGGAGCTAAACCGGGAAAGGTGGAACTGAATGTCATAAGCTATGGCGGCAGTGTTAACATCTCAACCGGAGCGGTTAACACTACAATTAATGGAATCATTTACACTGATAAGCATCTTGCTATCTATAAGGTTGGTAAGGTGCTCCTTCCTTTAGATTTCTTTGCGGTTGCTAAGACTCCTGCAAAGGCTCCATCTCTGGCTCCAGAACCTTCTGGTTCCGCAAAGGCTCCTAAAGCTGATATGTCATTGTCCCCAGATTCCTCTACGGAATCATCATCTCAGGTTAATCCCACTGATCAAAACTCTGGGACAATGAAAATCAGTGGATGTGGACTTGTTCTTGGTGCAGTTCTCGTGACTATATTTTCATCATAA 867 0.4544 MMIKNQSLLFFTITLLISTTTIAQLSPSISPVVQPNPKPTTTPAASPKPLVPSLPSNSPSENIPDTPTVDVIAILRQAKSFNTLIRLMKITQLINQLNSQLITSKSGGLTILAPDDAAFSQLKPGFLNSLSDGQKLELVQFHVISDYVSSSNFDTLTNPVRTLAGAKPGKVELNVISYGGSVNISTGAVNTTINGIIYTDKHLAIYKVGKVLLPLDFFAVAKTPAKAPSLAPEPSGSAKAPKADMSLSPDSSTESSSQVNPTDQNSGTMKISGCGLVLGAVLVTIFSS 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00232 288 FunFam Fasciclin-like arabinogalactan protein 11 54 214 - -
Arst3g00232 288 MobiDBLite consensus disorder prediction 246 267 - -
Arst3g00232 288 MobiDBLite consensus disorder prediction 227 267 - -
Arst3g00232 288 Gene3D FAS1 domain 54 214 IPR036378 -
Arst3g00232 288 MobiDBLite consensus disorder prediction 32 54 - -
Arst3g00232 288 Pfam Fasciclin domain 80 214 IPR000782 -
Arst3g00232 288 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 7 273 IPR045003 -
Arst3g00232 288 ProSiteProfiles FAS1/BIgH3 domain profile. 68 212 IPR000782 -
Arst3g00232 288 SMART fasc_3 110 215 IPR000782 -
Arst3g00232 288 MobiDBLite consensus disorder prediction 29 63 - -
Arst3g00232 288 SUPERFAMILY FAS1 domain 63 215 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00232 Arst-Chr3 1617901 1619123 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00232 - - gmx:100790242 361.303