Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00231 ATGAAGAAGCAGCAGGTAACAGGATTGTACCTTGTCTTGCTAATGTTGTGCTGCACCATCATTCAGGCATTTTCACAAACACCTGCAGCGTCCCCAAAACCAGCACCAAAAGCAGCAGCATCATCACCAAAAGCAACAACAAAAAAAGCACCGTCACCAAAGCCATTGGTGCCAACACTGCCGCAGTCACCAGACTCATCAGATGCAGCACCAGACGACATCACAAAGATTCTGAAGAAGGCGAAGATCTTCAACGTCCTAATCCGTCTGATGAAAACAACAGAGATAATGAACAACATCAACTCGCAGCTCATAACAGCCAAGACGGGAGGCATAACGATCCTGGCGCCGGACGACGACGCGTTCTCGAATCTGAAGGCAGGATTCCTGAACTCATTGGACGAAAAACAGAAGATAGAGCTGGTGCAGTTCCACATACTGCCGGAGTTTGTGGCCAGCAACAACTTCGACTCTTTGGCGAATCCGGTGCAGACGGTGGCGGGAAAAGATCCGGAGAGGCTGCCACTGAACGTGAATGCGTTGGGGAACAGTGTGAACATATCAACGGGAGTGGTGAATGCGTCGGTGGTGGGAGTTGTGTACTCCGATAACAAACTCGCTATATACAAAGTGGATAAGGTGCTTCTTCCTTTGGATTTCTTTCAGAAAGCTAAGCCTCCTGCTTTGGCTCCCACCGCTCTCGCAAAGGCACCTAAGGCCGCTAAAGAGAACACCGCCGCCGACGATCAAGACGGTGACGCCACTCCCGCCGATCAGCAAAAATCTGCGGCTGCTATTTTTGGAAAACCATTGGTGTCAGTTGCTGTAGCTTTTCTTGTAGCAGTGATGTGGAATTGA 858 0.4988 MKKQQVTGLYLVLLMLCCTIIQAFSQTPAASPKPAPKAAASSPKATTKKAPSPKPLVPTLPQSPDSSDAAPDDITKILKKAKIFNVLIRLMKTTEIMNNINSQLITAKTGGITILAPDDDAFSNLKAGFLNSLDEKQKIELVQFHILPEFVASNNFDSLANPVQTVAGKDPERLPLNVNALGNSVNISTGVVNASVVGVVYSDNKLAIYKVDKVLLPLDFFQKAKPPALAPTALAKAPKAAKENTAADDQDGDATPADQQKSAAAIFGKPLVSVAVAFLVAVMWN 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00231 285 ProSiteProfiles FAS1/BIgH3 domain profile. 71 215 IPR000782 -
Arst3g00231 285 SMART fasc_3 113 218 IPR000782 -
Arst3g00231 285 MobiDBLite consensus disorder prediction 28 71 - -
Arst3g00231 285 FunFam Fasciclin-like arabinogalactan protein 11 59 217 - -
Arst3g00231 285 Gene3D FAS1 domain 57 217 IPR036378 -
Arst3g00231 285 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 10 275 IPR045003 -
Arst3g00231 285 Pfam Fasciclin domain 84 217 IPR000782 -
Arst3g00231 285 SUPERFAMILY FAS1 domain 57 218 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00231 Arst-Chr3 1615738 1616832 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00231 - - gmx:106794109 322.783