Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00230 ATGAAGAGGCAGCAGGTAACAGGATTGTACCTTGTCTTGCTAGTGTTGTGCTGCACCATCATTCAGGCATTTTCACAAACACCTGCGGCGTCCCCAAAACCAGCACCAAAAGCAGTAGCATCACCACCAAAGGCAACAACAAAAAAAGCACCGTCACCAAAGCCATTGGTGCCAACACTGCCGCAGTCACCAGACTCATCAGATGCAGCACCAGACGACATCACAAAGATTCTGAAGAAGGCGAAGATCTTCAACGTCCTAATCCGTCTGATGAAAACAACAGAGATAATGAACAACATCAACTCGCAGCTCATAACCGCCAAGACCGGAGGCATAACGATCCTGGCGCCGGACGACGACGCCTTCTCCAACCTCAAGGCCGGATTCCTGAACTCATTGGACGAAAAACAGAAGATAGAGCTGGTGCAGTTCCACATACTGCCGGAGTTTGTGGCCAGCAACAACTTCGACTCTTTGGCGAATCCGGTGCAGACAGTGGCGGGAAAAGATCCGGAGAGGCTGCCGCTGAACGTGAATGCGTTGGGGAACAGTGTGAACATATCAACGGGAGTAGTGAATGCGTCGGTGGTGGGAGTTGTGTACTCCGATAACAAACTCGCCATATACAAAGTGGATAAGGTGCTTCTTCCTTTGGATTTCTTTCAGAAAGCTAAGCCTCCTGCTTTGGCTCCCACCGCTCTCGCAAAGGCACCTAAGTCAGCTAAAGAGAACACCGCCGCCGACGATCAAGACGGTGACGCCACTCCCGCCGATCAGAAAAAATCTGCGGCTGTGATTATTGGAAAACCATTGGTGTCAGTTGCGATAGCTTCTCTCGTAGCAGTGCCAATGATGATGTGGAGCTGA 867 0.5075 MKRQQVTGLYLVLLVLCCTIIQAFSQTPAASPKPAPKAVASPPKATTKKAPSPKPLVPTLPQSPDSSDAAPDDITKILKKAKIFNVLIRLMKTTEIMNNINSQLITAKTGGITILAPDDDAFSNLKAGFLNSLDEKQKIELVQFHILPEFVASNNFDSLANPVQTVAGKDPERLPLNVNALGNSVNISTGVVNASVVGVVYSDNKLAIYKVDKVLLPLDFFQKAKPPALAPTALAKAPKSAKENTAADDQDGDATPADQKKSAAVIIGKPLVSVAIASLVAVPMMMWS 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00230 288 ProSiteProfiles FAS1/BIgH3 domain profile. 71 215 IPR000782 -
Arst3g00230 288 SMART fasc_3 113 218 IPR000782 -
Arst3g00230 288 MobiDBLite consensus disorder prediction 233 257 - -
Arst3g00230 288 MobiDBLite consensus disorder prediction 28 71 - -
Arst3g00230 288 MobiDBLite consensus disorder prediction 242 256 - -
Arst3g00230 288 SUPERFAMILY FAS1 domain 57 218 IPR036378 -
Arst3g00230 288 Pfam Fasciclin domain 84 217 IPR000782 -
Arst3g00230 288 Gene3D FAS1 domain 58 217 IPR036378 -
Arst3g00230 288 FunFam Fasciclin-like arabinogalactan protein 11 59 217 - -
Arst3g00230 288 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 10 274 IPR045003 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00230 Arst-Chr3 1606512 1607720 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00230 - - gmx:102665444 323.168