Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00227 ATGAGAGAAGCTACAAAGATTCTAGTGTTCCATTTGGTTTGGTTCCTCTGCATTCATGTCCCTCCTATGTTTTGTGCCAATGTAACATATGATCACAGAGCATTACTCATTGATGGCAAGCGTAGAGTCTTCATTTCTGGTTCTATTCATTACCCTCGTAGCACTCCTCAGATGTGGCCAGACCTGATTCAGAAGTCGAAAGATGGAGGGCTTGATGTTATTGAGACTTATGTTTTTTGGAACTTTCATGAACCAGTTAGAGGCCAGTATTATTTTGAAGGAAGGGGTGATTTGGTAAATTTTGTAAAGTTAGTAGCAGCAGCAGGATTATATGTACATTTACGTATTGGACCTTATGCTTGTGCTGAATGGAACTATGGAGGTTTCCCTCTATGGCTGCATTTTATTCCAGGAATTAAATTCCGTACTGATAATGAACCTTTTAAGGCAGAAATGCAGAGATTCACTGCTAAGATTGTGGATATGATGAAGCAAGAAAATCTCTATGCTTCACAGGGAGGACCTATTATTTTATCTCAGATTGAGAATGAGTATGGAAACATTGATAAACCCTATGGTGCTGCTGGAAAATCCTACATAAAATGGGCAGCATCAATGGCTACATCCCTTAATACAGGGGTACCTTGGGTCATGTGCCAGCAACCAGATGCTCCTGATCCTATGATTAACACATGTAATGGATTTTACTGTGATCAATTCACACCAAATTCAAATGCAAAGCCAAAGATGTGGACTGAGAATTGGAGTGGATGGTTTCTTTCATTTGGAGGTGCTGTGCCTTATAGACCTGTGGAAGATATTGCATTTGCTGTGGCACGTTTTTACCAAAGAGGTGGAACTTTTCAAAACTACTATATGTACCATGGAGGAACCAACTTTGGCAGGACTAGTGGTGGACCTTTCATTTCCACTAGTTATGATTATGATGCACCCATTGATGAGTATGGTATTATTAGCCAACCAAAATGGGGCCACCTTAGAGATTTGCACAAGGCCATTAAGCTTTGTGAAGAAGCACTTATAGCTACAGATCCAACAATAACATCTCTTGGTTCAAATCTAGAGGCTGCAGTATACAAATCAGGAACTGTGTGTGCTGCTTTTCTTGCAAACATTGGCACATCAGATTCAACAGCAAATTTCAATGGCAATTCATATCAGTTGCCAGCATGGTCTGTGAGCATCTTACCAGATTGCAAGAATGTTGTGCTTAACACTGCAAAGATTAATTCTGCATCTACAACTTCAAGCTTCATAACTCAATCTTTGAAACTGAAGGAGGATGGTGGTGCTTTAGAAGATTCTAGCAGTGAATGGAGTTGGATAAGTGAACCAATTGGAATTTCAAAGAATGATTCATTCTCAAAATTTGGATTAGTAGAGCAAATAAATACCACTGCTGATAAGAGTGACTATTTGTGGTACTCATTAAGCATTGATTTTGAAGATGATGTTAGTGCTCAAACTGTTCTTCACATTGAATCCCTTGGACATGCCCTTCATGCTTTCATAAATGGGAAGCTTGCAGGGAGTGGAAAAGGAAACAGTGGCAATGCTAAAGTCAATGTGGATATCCCCATCACACTTGTAGCTGGGAAGAACACAATTGATCTCTTGAGTTTAACTGTGGGACTTCAAAACTATGGATCTTTCTTTGACACATGGGGTGCTGGGATCACTGGACCAGTGACATTGAAAGGATTGAAGAATGGAACTACTATTGACCTCTCCTCGCAGCAATGGACATATCAGATTGGTCTTCAAGGTGAAGACTTAGGTCTATCTAGTGGAAGTGTTGGACAGTGGAACTCACAATCAAACTTACCTAAGAATCAACCCTTGACTTGGTACAAGACAAACTTTGTTGCTCCCTCTGGCAATGATCCGGTTGCAATCGACTTCACTGGGATGGGGAAAGGAGAAGCTTGGGTGAATGGACAGAGTATTGGAAGATTCTGGCCTACATATGTCTCTCCAAATTCTGGTTGTGCAACTTCATGCAATTATAGAGGATCTTATAGTTCATCCAAATGCCTCAAGAACTGTGGAAAGCCATCACAAACATTATACCATGTCCCAAGATCATGGTTGCAAACAGATAGCAACACTCTTGTGTTGTTTGAGGAAAGTGGAGGTGACCCTACACAAATCTCTTTTGCTACAAAGCAGATAGGAAGCTTGTGCTCACATGTATCTGAGTCTCACCCTCCACCAATAGACATGTGGAATTCAGATTCAGAATCAGGAAGAAGATCAGGGCCAGTTCTGTCACTAGAGTGTCCTAATCCTAAGCAGATCATCTTCAAATTCGCCAGTTTCGGAACACCTAGTGGGAGTTGTGGAAGCTTCAACCATGGTAGCTGCAGCAGCAACAAGGCTCTATCCATTGTTAAGAAGGCCTGCATTGGATCAAGCAGCTGTAAAATTAATGTATCAATTGATACATTTGGAGATCCGTGTAGAAGAGTAACTAAAAGTCTTGCTGTTGAAGCTTCTTGTACATAG 2526 0.4082 MREATKILVFHLVWFLCIHVPPMFCANVTYDHRALLIDGKRRVFISGSIHYPRSTPQMWPDLIQKSKDGGLDVIETYVFWNFHEPVRGQYYFEGRGDLVNFVKLVAAAGLYVHLRIGPYACAEWNYGGFPLWLHFIPGIKFRTDNEPFKAEMQRFTAKIVDMMKQENLYASQGGPIILSQIENEYGNIDKPYGAAGKSYIKWAASMATSLNTGVPWVMCQQPDAPDPMINTCNGFYCDQFTPNSNAKPKMWTENWSGWFLSFGGAVPYRPVEDIAFAVARFYQRGGTFQNYYMYHGGTNFGRTSGGPFISTSYDYDAPIDEYGIISQPKWGHLRDLHKAIKLCEEALIATDPTITSLGSNLEAAVYKSGTVCAAFLANIGTSDSTANFNGNSYQLPAWSVSILPDCKNVVLNTAKINSASTTSSFITQSLKLKEDGGALEDSSSEWSWISEPIGISKNDSFSKFGLVEQINTTADKSDYLWYSLSIDFEDDVSAQTVLHIESLGHALHAFINGKLAGSGKGNSGNAKVNVDIPITLVAGKNTIDLLSLTVGLQNYGSFFDTWGAGITGPVTLKGLKNGTTIDLSSQQWTYQIGLQGEDLGLSSGSVGQWNSQSNLPKNQPLTWYKTNFVAPSGNDPVAIDFTGMGKGEAWVNGQSIGRFWPTYVSPNSGCATSCNYRGSYSSSKCLKNCGKPSQTLYHVPRSWLQTDSNTLVLFEESGGDPTQISFATKQIGSLCSHVSESHPPPIDMWNSDSESGRRSGPVLSLECPNPKQIIXFKFASFGTPSGSCGSFNHGSCSSNKALSIVKKACIGSSSCKINVSIDTFGDPCRRVTKSLAVEASCT 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00227 842 FunFam Beta-galactosidase 595 735 - -
Arst3g00227 842 Pfam Beta-sandwich domain in beta galactosidase 347 416 IPR041392 -
Arst3g00227 842 FunFam Beta-galactosidase 292 417 - -
Arst3g00227 842 SUPERFAMILY Galactose-binding domain-like 400 575 IPR008979 -
Arst3g00227 842 PRINTS Glycosyl hydrolase family 35 signature 307 323 IPR001944 GO:0004553|GO:0005975
Arst3g00227 842 PRINTS Glycosyl hydrolase family 35 signature 287 302 IPR001944 GO:0004553|GO:0005975
Arst3g00227 842 PRINTS Glycosyl hydrolase family 35 signature 38 55 IPR001944 GO:0004553|GO:0005975
Arst3g00227 842 PRINTS Glycosyl hydrolase family 35 signature 59 77 IPR001944 GO:0004553|GO:0005975
Arst3g00227 842 PRINTS Glycosyl hydrolase family 35 signature 646 662 IPR001944 GO:0004553|GO:0005975
Arst3g00227 842 PRINTS Glycosyl hydrolase family 35 signature 114 133 IPR001944 GO:0004553|GO:0005975
Arst3g00227 842 PRINTS Glycosyl hydrolase family 35 signature 171 186 IPR001944 GO:0004553|GO:0005975
Arst3g00227 842 PRINTS Glycosyl hydrolase family 35 signature 250 265 IPR001944 GO:0004553|GO:0005975
Arst3g00227 842 PRINTS Glycosyl hydrolase family 35 signature 619 633 IPR001944 GO:0004553|GO:0005975
Arst3g00227 842 FunFam Beta-galactosidase 418 574 - -
Arst3g00227 842 SUPERFAMILY (Trans)glycosidases 27 344 IPR017853 -
Arst3g00227 842 SUPERFAMILY Galactose-binding domain-like 587 753 IPR008979 -
Arst3g00227 842 FunFam Beta-galactosidase 23 343 - -
Arst3g00227 842 ProSiteProfiles SUEL-type lectin domain profile. 757 842 IPR000922 GO:0030246
Arst3g00227 842 CDD Gal_Rha_Lectin_BGal 760 841 - -
Arst3g00227 842 Gene3D - 751 842 IPR043159 -
Arst3g00227 842 Gene3D - 426 573 - -
Arst3g00227 842 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 173 185 IPR019801 GO:0004553|GO:0005975
Arst3g00227 842 Pfam Galactose binding lectin domain 765 841 IPR000922 GO:0030246
Arst3g00227 842 Gene3D Glycosidases 23 343 - -
Arst3g00227 842 Gene3D - 591 735 - -
Arst3g00227 842 PANTHER BETA-GALACTOSIDASE RELATED 20 768 IPR001944 GO:0004553|GO:0005975
Arst3g00227 842 Pfam Glycosyl hydrolases family 35 35 339 IPR031330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00227 Arst-Chr3 1588120 1594682 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00227 25 696 Glycoside Hydrolase AT2G28470 76.583 0.0 1084
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00227 - - gmx:100793198 1506.12