Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00226 ATGGTAGCAGCAATGATTGTAAAGAAGGTTGATCAGTTCATTTTTCTTTGGTTCCTTGCCATTTATGCACCAGCAGCTACATTTTGTGCCAATGTGACATATGATCACAGAGCATTGATCATTGATGGCAACCGTAGGGTGTTGATTTCTGGTTCCATTCATTACCCTCGTAGCACTCCTGAGATGTGGCCAGACCTTATCCAGAGATCCAAAGATGGAGGAGTTGATGTGATTGAGACCTATGTTTTCTGGAACCTACACGAACCAATTCGAGGCCAGTATAATTTTGAAGGAAGGAGTGATTTGGTCAAATTTGTAAAGGAAGTGGCAGCAGCAGGTCTATATGTTCATCTGCGAATCGGTCCATATGTCTGTGCTGAATGGAACTACGGGGGTTTCCCTATTTGGCTGCATTTCATTCCAGGGATTAAGTTTCGAACTGATAATGAACCATTTAAGGCAGAGATGAAGAGATTCACTGCCAAGATTGTCAACATGATGAAGCAAGAGAGCCTCTATGCCTCACAAGGAGGACCTATTATCTTATCACAGATTGAAAATGAGTATGGAGATGTTGATTGGGCCTATGGTCCTGCAGCAAAACCTTACATAAAATGGGCAGCATCAATGGCTACTTCTCTTGATACTGGTGTCCCCTGGGTTATGTGCATGCAAGCAGATGCTCCTAATCCAATTATTGACACATGCAATGGATTTTACTGCGATCAGTTCACACCAAACTCTAATGCTAAGCCGAAGATTTGGACCGAGGGCTATAACGGATGGTTTCTTTATTATGGTGGAGCTGTACCTTACAGACCTGTGGAAGATCTTGCATTTGCTGTGGCAAGATTTTATCAACTGGGTGGAACTTTTATGAACTACTATATGTATCATGGAGGAACCAATTTTGGTAGAACCACAGGTGGACCTTTTGTTGCTACTAGTTATGACTATGATGCACCACTTGATGAATATGGAATCATTAGACAGCCTAAGTGGGGACACCTTAAAGATTTGCATGATTCCATAAAGCTTTGTGAAGAAGCATTGATTGCTACTGATCCAGCAGTTACATCTCTTGATCCAAATATAGAGGTTGCAGTTTACAAAACAGATAATGTGTGTGCTGCTTTCCTTGCTAACATCAATACTACAATTGATGTGACTGTGAATTTTAGCGGCAACTCGTATCGGTTGCCGGCATGGTCAGTGAGCATCTTACCAGACTGCAAGAATGTTGTGTTTAATACTGCAAAGATTAATTCTGCATCCACAGTTTCAATATTCAGAGCTGAGTCTTTAAAACAAGATGTTGGTTCTTTGGAAAATGATAGCTTGGGATGGAGTTGGATTAGTGAACCAATTGGAATTTCAAAGAATGATTCATTCTCAAAGTTTGGATTGCTAGAGCAAATAAACACCACTGCTGATAGAAGTGACTATTTTTGGTACTCATTAAGCATTGATCTTGAAGATGGTGATGATGCTGGTTCTCAAACTGTTCTTCACATTGAATCCCTTGGTCATGCCCTTTATGCTTTCATAAATGGGAAGCTTGCAGGGGGTGGAACTGGCAACAACACCAATGCCACTGTCAACGTCGACATTCCTGTCACACTTGTAACTGGAAAGAACACAATTGACCTCTTGAGTTTAACTGTAGGACTTCAGAACTTTGGAGCATTTTTTGACACATGGGGTGCTGGAATCACTGGACCAGTAACATTGAAAGGATTGAAGAATGGAAGTACTATTGATCTCTCCTCCCAACAATGGACTTATCAGGTAGGCCTTCTTGGTGAAGACTTAGGTCTGTCTAGTGGAAATGCTGGACAGTTGAATTCACAATCTACCTTACCTAAGAATCAATCACTAACATGGTACAAGACAAACTTTGTTGCTCCCTCTGGCAATGATCTGGTTGCAATCGACTTCACCGGGATGGGGAAAGGAGAGGCTTGGGTGAATGGACAGAGCATTGGAAGATACTGGCCTACATATGTCTCTCCAAATTCTGGTTGTACCAACTCATGTGACTATAGAGGGTACTATTATCAATCCAAATGTCTCAGGAACTGTGGAAAACCATCACAGACATTATACCATGTACCAAGATCATGGTTAAAATCAGACAACAACACTCTTGTATTGTTTGAGGAAAGTGGAGGTGATCCTACAAAAATATCTTTTGCTAGAAAGCAGATAGGAAGTGTGTGTTCATATATATCTGAATCTCACCCTCCACCAATAGCCTTGTGGAATTCAGACACAGAATCAGGGAGAAAAGCAGGGCCAGTGTTGTCACTGGACTGCCCTTATCCTAATCAGGTGATCTCTTCCATTAAATTCGCGAGTTTTGGAACACCTTATGGAACTTGTGGAAACTTCAACCATGGAAGCTGCAGCAGCAATAGTGCTCTATACATTGTGCAAAAGGCTTGCATTGGATCAAGCAGTTGTAACATCAATGTATCGGTTAACACATTCGGAGATCCGTGTAAAGGAGTGACTAAAAGACTTGCTGTTGAAGCTTCTTGTATGTAG 2547 0.415 MVAAMIVKKVDQFIFLWFLAIYAPAATFCANVTYDHRALIIDGNRRVLISGSIHYPRSTPEMWPDLIQRSKDGGVDVIETYVFWNLHEPIRGQYNFEGRSDLVKFVKEVAAAGLYVHLRIGPYVCAEWNYGGFPIWLHFIPGIKFRTDNEPFKAEMKRFTAKIVNMMKQESLYASQGGPIILSQIENEYGDVDWAYGPAAKPYIKWAASMATSLDTGVPWVMCMQADAPNPIIDTCNGFYCDQFTPNSNAKPKIWTEGYNGWFLYYGGAVPYRPVEDLAFAVARFYQLGGTFMNYYMYHGGTNFGRTTGGPFVATSYDYDAPLDEYGIIRQPKWGHLKDLHDSIKLCEEALIATDPAVTSLDPNIEVAVYKTDNVCAAFLANINTTIDVTVNFSGNSYRLPAWSVSILPDCKNVVFNTAKINSASTVSIFRAESLKQDVGSLENDSLGWSWISEPIGISKNDSFSKFGLLEQINTTADRSDYFWYSLSIDLEDGDDAGSQTVLHIESLGHALYAFINGKLAGGGTGNNTNATVNVDIPVTLVTGKNTIDLLSLTVGLQNFGAFFDTWGAGITGPVTLKGLKNGSTIDLSSQQWTYQVGLLGEDLGLSSGNAGQLNSQSTLPKNQSLTWYKTNFVAPSGNDLVAIDFTGMGKGEAWVNGQSIGRYWPTYVSPNSGCTNSCDYRGYYYQSKCLRNCGKPSQTLYHVPRSWLKSDNNTLVLFEESGGDPTKISFARKQIGSVCSYISESHPPPIALWNSDTESGRKAGPVLSLDCPYPNQVISSIKFASFGTPYGTCGNFNHGSCSSNSALYIVQKACIGSSSCNINVSVNTFGDPCKGVTKRLAVEASCM 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00226 848 FunFam Beta-galactosidase 601 740 - -
Arst3g00226 848 ProSiteProfiles SUEL-type lectin domain profile. 762 848 IPR000922 GO:0030246
Arst3g00226 848 Gene3D - 429 578 - -
Arst3g00226 848 FunFam Beta-galactosidase 759 848 - -
Arst3g00226 848 Gene3D - 758 848 IPR043159 -
Arst3g00226 848 SUPERFAMILY (Trans)glycosidases 32 348 IPR017853 -
Arst3g00226 848 Pfam Beta-sandwich domain in beta galactosidase 351 421 IPR041392 -
Arst3g00226 848 FunFam Beta-galactosidase 28 347 - -
Arst3g00226 848 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 177 189 IPR019801 GO:0004553|GO:0005975
Arst3g00226 848 PANTHER BETA-GALACTOSIDASE RELATED 26 767 IPR001944 GO:0004553|GO:0005975
Arst3g00226 848 Gene3D - 582 675 - -
Arst3g00226 848 Gene3D - 683 741 - -
Arst3g00226 848 FunFam Beta-galactosidase 423 579 - -
Arst3g00226 848 Pfam Galactose binding lectin domain 770 847 IPR000922 GO:0030246
Arst3g00226 848 Pfam Glycosyl hydrolases family 35 39 342 IPR031330 -
Arst3g00226 848 SUPERFAMILY Galactose-binding domain-like 405 580 IPR008979 -
Arst3g00226 848 FunFam Beta-galactosidase 296 422 - -
Arst3g00226 848 SUPERFAMILY Galactose-binding domain-like 592 757 IPR008979 -
Arst3g00226 848 CDD Gal_Rha_Lectin_BGal 765 847 - -
Arst3g00226 848 Gene3D Glycosidases 26 347 - -
Arst3g00226 848 PRINTS Glycosyl hydrolase family 35 signature 311 327 IPR001944 GO:0004553|GO:0005975
Arst3g00226 848 PRINTS Glycosyl hydrolase family 35 signature 291 306 IPR001944 GO:0004553|GO:0005975
Arst3g00226 848 PRINTS Glycosyl hydrolase family 35 signature 63 81 IPR001944 GO:0004553|GO:0005975
Arst3g00226 848 PRINTS Glycosyl hydrolase family 35 signature 651 667 IPR001944 GO:0004553|GO:0005975
Arst3g00226 848 PRINTS Glycosyl hydrolase family 35 signature 624 638 IPR001944 GO:0004553|GO:0005975
Arst3g00226 848 PRINTS Glycosyl hydrolase family 35 signature 254 269 IPR001944 GO:0004553|GO:0005975
Arst3g00226 848 PRINTS Glycosyl hydrolase family 35 signature 42 59 IPR001944 GO:0004553|GO:0005975
Arst3g00226 848 PRINTS Glycosyl hydrolase family 35 signature 175 190 IPR001944 GO:0004553|GO:0005975
Arst3g00226 848 PRINTS Glycosyl hydrolase family 35 signature 118 137 IPR001944 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00226 Arst-Chr3 1582936 1587774 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00226 2 701 Glycoside Hydrolase AT2G28470 71.449 0.0 1041
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00226 - - gmx:100793198 1461.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g00226 3 1582936 1587774 Arst3g00226 3 1582936 1587774 ECH