Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Arst3g00190 | ATGATGGAGAGAGAAGAAAAAGAAGAACAAGAACAACAACTAGAAGAAGAAGAAGAAGAAGAATCATCAAGGTTCAAGAGGGTATGTGTGTTTTGTGGTAGTAGCCCTGGGAACAAGAGTAGCTATAAGGATGCTGCTATTGACCTTGGCAAAGAACTGGTGTCAAGAAATATTGATTTGGTTTATGGAGGAGGCAGCATTGGCTTGATGGGATTGGTTTCTCAGGCTGTTTATGATGGAGGTCGCCATGTTATTGGAGTTATTCCCAAGACACTCATGCCAAGAGAGATTACTGGAGAGACAGTGGGGGAAGTAAAAGCAGTGGCAGGCATGCATCAAAGAAAGGCAGAGATGGCTAAGCATTCTGATGCCTTCATTGCTCTACCAGGTGGCTATGGAACTCTTGAGGAGCTTCTTGAGGTCATAACCTGGGCTCAGCTGGGAATCCATGACAAACCAGTGGGGTTACTGAATGTAGATGGATACTACAATTCGTTATTGTCTTTCATTGACAAAGCTGTGGAAGAAGGCTTCATTAGCCCTAAAGCTCGCCACATAATTGTATCTGCCCCTTCACCAAAAGAACTTGTCAAAAAGATGGAGGAATATTCCCCACAACATGAAAGAGTTGCATCTAAGTTAAGCTGGGAAGCTGAGCAAGTAGGATCATACACCTCAAATTGTGACATCTCAAGGTGA | 699 | 0.4349 | MMEREEKEEQEQQLEEEEEEESSRFKRVCVFCGSSPGNKSSYKDAAIDLGKELVSRNIDLVYGGGSIGLMGLVSQAVYDGGRHVIGVIPKTLMPREITGETVGEVKAVAGMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGFISPKARHIIVSAPSPKELVKKMEEYSPQHERVASKLSWEAEQVGSYTSNCDISR | 232 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Arst3g00190 | 232 | PANTHER | LOG FAMILY PROTEIN YJL055W | 17 | 223 | - | - | |
| Arst3g00190 | 232 | NCBIfam | Rossman fold protein, TIGR00730 family | 26 | 203 | IPR005269 | GO:0009691|GO:0016787 | |
| Arst3g00190 | 232 | Coils | Coil | 1 | 27 | - | - | |
| Arst3g00190 | 232 | FunFam | CASP-like protein | 16 | 202 | - | - | |
| Arst3g00190 | 232 | SUPERFAMILY | MCP/YpsA-like | 24 | 203 | - | - | |
| Arst3g00190 | 232 | Coils | Coil | 232 | 232 | - | - | |
| Arst3g00190 | 232 | Pfam | Possible lysine decarboxylase | 70 | 200 | IPR031100 | - | |
| Arst3g00190 | 232 | Gene3D | - | 14 | 202 | - | - | |
| Arst3g00190 | 232 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Arst3g00190 | Arst-Chr3 | 1337334 | 1341922 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Arst3g00190 | K22522 | - | gmx:100819644 | 394.045 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Arst8g01886 | 8 | 27111020 | 27117051 | Arst3g00190 | 3 | 1337334 | 1341922 | PCT |