Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00185 ATGGCTTATTCCAACAAAATATTATTCCAATGCATTTCATTGGCTTTGGTTGTTCTTTTTGGAATCTTGTCTTTAGAGGCCAATGGTAGGATTCTTGAAGATTCCATAATGCATGAGAGACATGAAAAATGGATGGTTCAACATGGTAAATACTATAAAGACTCTAATGAAAAGGAATTAAGGTTCAAAATTTTCAAAGAAAATGTTGAACGCATTGAGGCCTTTAATAGTGATGGAAACAAGTCTTACAAGCTTGGCATTAATCAATTTGCTGATCTAACAAATGATGAGTTTAAGGGTAGGAATAAGTTCAAGGGTCACATGTGTTCCACAATCACAAAGACACCAACATTTAGGTATGAAAATGTGAGTGCTGTTCCACCTTCAATTGATTGGAGACAGAAAGGTGCTGTCACACCTATTAAGGACCAAGGCCAATGTGGATGTTGTTGGGCATTTTCTGCTGTGGCAGCAACAGAAGGAATCACAAAACTAACAACAGGGAAATTAATCTCCTTATCAGAACAAGAGCTTGTTGATTGTGACACAAAAGGTGTGGACCAAGGTTGTGAAGGTGGTCTAATGGACAATGCATTCAAATTCATAATCCAAAACAAAGGCCTCACAACAGAATCCAATTATCCATACACAGCATCTGATGGAACATGCAACACAAAAGCAGAATCAAACCATGCAGCCAGCATTAAAGGGTTTGAAGATGTACCTGCCAACAGTGAAAGTGCACTTCTAAAAAGTGTTGCCAATCAACCAGTTTCCGTTGCCATTGATGCTAGTGACTTTGGTTTCCAGTTTTACTCAGGTGGTGTTTTCACTGGATCTTGTGGTACTAGTTTGGATCATGGTGTCACTGCAGTTGGTTATGGAGTTAGTGATGATGGAACTAAGTATTGGTTGGTTAAGAATTCATGGGGTGAAACATGGGGTGAACAAGGTTACATTAGAATGCAGAGAGACATTGATGCTAAACAAGGTTTGTGTGGCATTGCAATGCAAGCTTCTTATCCTACTGCATAA 1035 0.3884 MAYSNKILFQCISLALVVLFGILSLEANGRILEDSIMHERHEKWMVQHGKYYKDSNEKELRFKIFKENVERIEAFNSDGNKSYKLGINQFADLTNDEFKGRNKFKGHMCSTITKTPTFRYENVSAVPPSIDWRQKGAVTPIKDQGQCGCCWAFSAVAATEGITKLTTGKLISLSEQELVDCDTKGVDQGCEGGLMDNAFKFIIQNKGLTTESNYPYTASDGTCNTKAESNHAASIKGFEDVPANSESALLKSVANQPVSVAIDASDFGFQFYSGGVFTGSCGTSLDHGVTAVGYGVSDDGTKYWLVKNSWGETWGEQGYIRMQRDIDAKQGLCGIAMQASYPTA 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00185 344 CDD Peptidase_C1A 127 342 IPR039417 -
Arst3g00185 344 PRINTS Papain cysteine protease (C1) family signature 303 309 IPR000668 GO:0006508|GO:0008234
Arst3g00185 344 PRINTS Papain cysteine protease (C1) family signature 287 297 IPR000668 GO:0006508|GO:0008234
Arst3g00185 344 PRINTS Papain cysteine protease (C1) family signature 144 159 IPR000668 GO:0006508|GO:0008234
Arst3g00185 344 Gene3D Cysteine proteinases 24 344 - -
Arst3g00185 344 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 32 337 IPR013128 GO:0008234
Arst3g00185 344 FunFam Senescence-specific cysteine protease SAG39 23 344 - -
Arst3g00185 344 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 303 322 IPR025661 -
Arst3g00185 344 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 144 155 IPR000169 -
Arst3g00185 344 SMART Inhibitor_I29_2 41 98 IPR013201 -
Arst3g00185 344 SUPERFAMILY Cysteine proteinases 37 342 IPR038765 -
Arst3g00185 344 SMART pept_c1 126 343 IPR000668 GO:0006508|GO:0008234
Arst3g00185 344 Pfam Papain family cysteine protease 126 343 IPR000668 GO:0006508|GO:0008234
Arst3g00185 344 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 285 295 IPR025660 -
Arst3g00185 344 Pfam Cathepsin propeptide inhibitor domain (I29) 41 98 IPR013201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00185 Arst-Chr3 1305487 1307476 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00185 - - gmx:100778111 556.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g00185 3 1305487 1307476 Arst3g00185 3 1305487 1307476 ECH