Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00139 ATGGCATCAAAAAGGTCTCTCATCACTCTTTGTTTGTTCTTGTTCTACTTTTCATTAACATTATGTTTGTGTTATGGAACAAGAACATTGTCTCCATTATCATCATCCACAAATGATGTTCTTCTTAGGATGTCCCCAGCAGAAAGGCTGATAAGAAGCTTCAATCTGTTTCCAAGAAAATCAGTAAACATAAGAAAAGGAAGTAGTGATGATGTGTTTGTCCCTGGAAAATTAGTGGAGAAGAAGTTCTCATTTCTTGCTGATTCTTCTGTTCAAGAATTAGGTCATCATGCCGGCTATTATTCTCTCCCTCGTACCAAAGCCGCAAGGATGTTCTATTTTTTCTTTGAATCTCGGAACAATAATAGCAAAGATGCACCAGTTGTGATATGGTTGACTGGAGGACCAGGATGTGGCAGTGAACTTGCATTGTTCTATGAGAATGGTCCTTTCAAAATTACTAATAACATGTCTCTTGTTTCCAATGACTATGGTTGGGACAAGGTTTCAAACCTTATATATGTTGATCAACCAACTGGGACAGGGTTCAGCTACAGTTCTGATGAGTCAGACCTTCGCCATGATGAAACGGGTGTTAGCAACGATCTTTACGATTTCTTACAGGCATTTTTCAAACAGCATCCTCAGTTTGTTAACAATGATTTTTATATCACCGGAGAATCATATGCTGGACACTATATTCCAGCTCTTGCATCTCGAATTCATCAAGCTAACAAACAAAAACAAGCCATTCTTATAAATCTAAAGGGTTTTGCTATTGGCAACGGATTAACCAATCCGGGGATTCAATATGCAGCATACACGGATTTTGCATTATCCAATAAATTAATTACACAGAGTGATTACAACAACATCAACTCCAGGGTCCAAGGATGTGAACAAGAAGTAAAAAATTGCGCAACTGAAGGTGGAGACCATTGTGCCGCCGCTAAAGCCACATGCGACCAAATATTCCAAAGTATCCTTAGCGCTGCTGGCAACGTTAATTACTATGACATTAGAAAAAAATGTGAAGGAGCTTTGTGCTATGACTTCTCAAACGTGGATAAACTCTTAAACGATAATTCAGTGAAGAAGGCTTTAGGTGTGGATGATGATTTGGACTATGTTTCATGCAGTGATGAAGTGTATTTTGATATGGTTAATGACTTCATGGTCAATTATGATGTGGGTATTCCACCTCTTCTTGAAGATGGGATTAGGTTTCTTGCCTATGCTGGTGAAGAAGATCTCATTTGCAATTGGCTAGGTAATATCAGATGGGTTAGTGCCATGAAATGGTCAGGTCAAAAAGAGTTTAACGCAGCTCCTACAGTCCAATATAAAGTCAATGGTGTAGAGGCAGGGTCTCTATCAAGCCATGGACCTCTCACTTTCTTGAAGGTATATAAAGCTGGACACTTGGTTCCTATGGACCAACCAGAAGCTGCACTTGATATGCTCACAAGATGGATGCAAGGCAAATTGAATTAA 1494 0.3916 MASKRSLITLCLFLFYFSLTLCLCYGTRTLSPLSSSTNDVLLRMSPAERLIRSFNLFPRKSVNIRKGSSDDVFVPGKLVEKKFSFLADSSVQELGHHAGYYSLPRTKAARMFYFFFESRNNNSKDAPVVIWLTGGPGCGSELALFYENGPFKITNNMSLVSNDYGWDKVSNLIYVDQPTGTGFSYSSDESDLRHDETGVSNDLYDFLQAFFKQHPQFVNNDFYITGESYAGHYIPALASRIHQANKQKQAILINLKGFAIGNGLTNPGIQYAAYTDFALSNKLITQSDYNNINSRVQGCEQEVKNCATEGGDHCAAAKATCDQIFQSILSAAGNVNYYDIRKKCEGALCYDFSNVDKLLNDNSVKKALGVDDDLDYVSCSDEVYFDMVNDFMVNYDVGIPPLLEDGIRFLAYAGEEDLICNWLGNIRWVSAMKWSGQKEFNAAPTVQYKVNGVEAGSLSSHGPLTFLKVYKAGHLVPMDQPEAALDMLTRWMQGKLN 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00139 497 Gene3D alpha/beta hydrolase 78 496 IPR029058 -
Arst3g00139 497 FunFam Carboxypeptidase 84 497 - -
Arst3g00139 497 Pfam Serine carboxypeptidase 94 494 IPR001563 GO:0004185|GO:0006508
Arst3g00139 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 464 477 IPR001563 GO:0004185|GO:0006508
Arst3g00139 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 162 174 IPR001563 GO:0004185|GO:0006508
Arst3g00139 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 175 185 IPR001563 GO:0004185|GO:0006508
Arst3g00139 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 210 235 IPR001563 GO:0004185|GO:0006508
Arst3g00139 497 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 92 481 IPR001563 GO:0004185|GO:0006508
Arst3g00139 497 SUPERFAMILY alpha/beta-Hydrolases 95 495 IPR029058 -
Arst3g00139 497 ProSitePatterns Serine carboxypeptidases, serine active site. 224 231 IPR018202 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00139 Arst-Chr3 950893 955051 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00139 K16298 - gmx:100797295 651.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g00139 3 950893 955051 Arst3g00139 3 950893 955051 ECH
Arst8g01916 8 27607179 27610380 Arst3g00139 3 950893 955051 PCT