Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00075 ATGGGTGAGTTTGATTCGCAGCCGAAGTTCATGATCCCAGAGAGAATCCAGGGGGTGAGTTATGACATAGCTGGGCAGATAAAGATGATATGGGAAGTGATGAAAGCGCCATTGATAGTGCCAATGCTGAAGCTTGGAGTGTACATTTGCCTTGCAATGTCGCTGATGCTGTTCATGGAGAGACTATACATGGGAATCGTCATCATCTTGGTCAAGCTCTTCTGGAAGAAACCAGAGCAGCGTTACAAGTATGAACCCATCCAAGATGATCTTGAACTTGGAAGCTCCAATTTCCCTGTAGTTCTCATTCAGATTCCAATGTTCAATGAGAAAGAGGTATACAAGGTGTCAATTGGTGCAGCTTGTAATCTTTCATGGCCTGCTGATCGTCTTGTCATCCAAATTCTTGATGATTCTACTGACCCTGCAATCAAGCAAATGGTGGAGATGGAATGCCAGAGATGGGGAAGTAAAGGCATAAACATAACATACCAAATAAGAGAAAACAGAACAGGATACAAAGCAGGTGCACTTAAAGAAGGTTTAAAGCGTAGCTATGTCAAACACTGTGAATACGTTGCAATATTCGATGCTGATTTCAGGCCTGAACCTGATTTCTTGAGAAGAGCCATTCCCTTCTTGATTGGCAATCCTGACATAGCTCTTGTTCAAGCTCGTTGGAGATTTGTGAATGCGGACGAGTGTTTGTTGACAAGAATGCAAGAGATGTCGTTGGATTACCATTTCACGGTGGAGCAAGAAGTTGGGTCAGCAACACATGCTTTCTTTGGTTTCAATGGGACAGCGGGTGTATGGAGAATAGCAGCAATTAATGAGGCTGGTGGCTGGAAAGATAGGACCACTGTGGAAGATATGGACCTTGCTGTTCGTGCTAGTCTTAGGGGCTGGAAATTCTTGTACCTTGGTGACCTTCAGGCCAAAAGTGAGCTTCCAAGTACTTTGAGAGCCTTTAGATTCCAGCAGCACCGTTGGTCTTGTGGTCCTGCTAATCTCTTCCGCAAAATGGTCATGGAGATAGTAAGAAACAAGAGAGTGAAGTTTTGGAAGAAAGTATACGTGATATACAGCTTCTTCTTTGTACGTAAGATCATAGCTCACATGGTGACATTCTTCTTCTACTGTGTGGTGCTTCCCCTGACAATTCTGGTCCCTGAGGTTCATGTTCCGATTTGGGGTGCTGTTTATATTCCTTCCATCATCACCATCCTCAATTCAGTAGGAACACCGAGGTCCATTCACTTGTTGTTCTATTGGATCCTTTTTGAGAATGTCATGTCTTTGCACCGAACCAAGGCTACATTTATTGGTTTGCTTGAAGCTGGCAGAGCCAATGAATGGGTTGTTACTGAAAAACTTGGAGATTCTGTCAACAACAACAAGAACAAAACAGCAGGAGATGCTGCTAAGAAGACTAATGCCAAATCCCCCAAAAGAACTAGATCCAAATTTGTCGAAAGACTTAATACATTGGAGCTGGGATTTGCAGCATTCCTCTTCATATGTGGATGCTATGATTTTGTGCATGGCAAAAACAATTACTTCATATACCTCTTCCTTCAGACCATAACATTCTCCATTGTAGGATTTGGCTATGTTGGCACCATTGTGTAA 1632 0.4301 MGEFDSQPKFMIPERIQGVSYDIAGQIKMIWEVMKAPLIVPMLKLGVYICLAMSLMLFMERLYMGIVIILVKLFWKKPEQRYKYEPIQDDLELGSSNFPVVLIQIPMFNEKEVYKVSIGAACNLSWPADRLVIQILDDSTDPAIKQMVEMECQRWGSKGINITYQIRENRTGYKAGALKEGLKRSYVKHCEYVAIFDADFRPEPDFLRRAIPFLIGNPDIALVQARWRFVNADECLLTRMQEMSLDYHFTVEQEVGSATHAFFGFNGTAGVWRIAAINEAGGWKDRTTVEDMDLAVRASLRGWKFLYLGDLQAKSELPSTLRAFRFQQHRWSCGPANLFRKMVMEIVRNKRVKFWKKVYVIYSFFFVRKIIAHMVTFFFYCVVLPLTILVPEVHVPIWGAVYIPSIITILNSVGTPRSIHLLFYWILFENVMSLHRTKATFIGLLEAGRANEWVVTEKLGDSVNNNKNKTAGDAAKKTNAKSPKRTRSKFVERLNTLELGFAAFLFICGCYDFVHGKNNYFIYLFLQTITFSIVGFGYVGTIV 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00075 543 Pfam Glycosyl transferase family group 2 192 400 IPR001173 -
Arst3g00075 543 SUPERFAMILY Nucleotide-diphospho-sugar transferases 96 380 IPR029044 -
Arst3g00075 543 CDD CESA_CaSu_A2 99 335 - -
Arst3g00075 543 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 90 318 IPR029044 -
Arst3g00075 543 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 24 541 - -
Arst3g00075 543 FunFam Glucomannan 4-beta-mannosyltransferase 9 90 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00075 Arst-Chr3 505493 509459 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00075 7 543 Miscellaneous Gene Families AT5G22740 82.189 0.0 924
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00075 K13680 - gmx:100802752 1014.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g00075 3 505493 509459 Arst3g00075 3 505493 509459 ECH
Arst6g02165 6 53874333 53882183 Arst3g00075 3 505493 509459 ECH