Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00068 ATGCACACTCTCTCACCGCCGTATTCCAACGCACTCAGCTACCTCCACCGGGGGAGTGAGCCCACATTTCGAGTCGTTCCAACCCGAATAACGGTTAAATGTGGTTACGGGTTCGAATCATCAAGCTTCTCGCAGGGAGTCGGGTCAACCCGAACGGACTGGCAGAGCGCATGCGCCATCCTATCCAGCAAGGTCGACTCTCAGAACGAGGATTCAAACCCCGCAGCTGCCGGAGAGAACATAGCCGCCGTGAACGGCCACAAATCCGCAGTAACAGACCTGAACCTAGTCCACGTCAGCGGCGAAAAAACGCTTCCTCCAAAGCCGCTCACCATCTCCGACCTATCGCCAGCACCGATGCACGGCTCACAGCTGCGCGTGGCATACCAGGGAGTCCCAGGTGCGTACTCCGAGGCTGCCGCTGGCAAAGCCTACCCTAACGGAGAAGCCATAGCTTGCGATCAGTTCGAGGTTGTTTTCCAAGCCGTTGAGCTCTGGATAGCCGATCGCGCCGTTCTACCCGTCGAAAACTCCCTCGGCGGCTCGATCCACCGGAACTACGACCTCCTCCTCCGCCACCGCCTCCACATCGTGGGCGAGGTCCAGCTCCCCGTTCACCACTGCCTCCTTGCCCTTCCCGGCGTCCGATCGGAGTACCTGACGCGCGTGATCTCTCACCCTCAGGCCCTCGCACAGTGCGAGCATACTCTCACCAAGCTCGGCCTCAACGTGGCTCGCGAAGCCGTAGACGACACCGCCGGCGCCGCGGAGTTCGTGGCCACCAACAACCTCCGAGACACTGCGGCAATCGCCAGCGCACGCGCGGCAGATCTGTACGGTCTTCAGATCCTGGCGGATGGGATCCAAGATGACCCGAATAACGTGACCCGGTTCGTGATGTTGGCCCGAGAACCAATCATTCCTCGCACGGACCGGCCTTTTAAGACGAGTATCGTGTTCGCGCACGATAAAGGGACCTCCGTGCTCTTTAAGGTGCTCTCGGCGTTTGCGTTTAGGAACATCAGTTTGACTAAGATCGAGTCAAGGCCGCATCGTAACCGTCCGATCCGGATTGTTGACGATGACAAGAATGAAGGGACAGCAAAGCACTTCGAGTACATGTTTTATGTTGATTTCGAGGCATCTATGGCTGAGGTCAGAGCACAGAATGCCCTGGCTGAGGTTCAAGAATTCACCTCCTTTTTGAGGGTTTTGGGTAGTTATCCCATGGATATGACACCGTGGAGCCCTTCTGCTTCTCCTTCTTCTCGGGGAGAGTAG 1281 0.5761 MHTLSPPYSNALSYLHRGSEPTFRVVPTRITVKCGYGFESSSFSQGVGSTRTDWQSACAILSSKVDSQNEDSNPAAAGENIAAVNGHKSAVTDLNLVHVSGEKTLPPKPLTISDLSPAPMHGSQLRVAYQGVPGAYSEAAAGKAYPNGEAIACDQFEVVFQAVELWIADRAVLPVENSLGGSIHRNYDLLLRHRLHIVGEVQLPVHHCLLALPGVRSEYLTRVISHPQALAQCEHTLTKLGLNVAREAVDDTAGAAEFVATNNLRDTAAIASARAADLYGLQILADGIQDDPNNVTRFVMLAREPIIPRTDRPFKTSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRIVDDDKNEGTAKHFEYMFYVDFEASMAEVRAQNALAEVQEFTSFLRVLGSYPMDMTPWSPSASPSSRGE 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00068 426 SUPERFAMILY ACT-like 298 411 IPR045865 -
Arst3g00068 426 Gene3D - 210 291 - -
Arst3g00068 426 FunFam Arogenate dehydratase 209 291 - -
Arst3g00068 426 FunFam Arogenate dehydratase 121 208 - -
Arst3g00068 426 ProSiteProfiles Prephenate dehydratase domain profile. 126 303 IPR001086 GO:0004664|GO:0009094
Arst3g00068 426 CDD PBP2_Ct-PDT_like 126 305 - -
Arst3g00068 426 PANTHER PREPHENATE DEHYDRATASE P PROTEIN 44 417 - -
Arst3g00068 426 FunFam Arogenate dehydratase 310 412 - -
Arst3g00068 426 CDD ACT_CM-PDT 315 409 - -
Arst3g00068 426 SUPERFAMILY Periplasmic binding protein-like II 126 309 - -
Arst3g00068 426 Gene3D - 310 412 - -
Arst3g00068 426 Gene3D - 121 209 - -
Arst3g00068 426 ProSitePatterns Prephenate dehydratase signature 1. 279 301 IPR018528 GO:0004664|GO:0009094
Arst3g00068 426 Pfam Prephenate dehydratase 127 305 IPR001086 GO:0004664|GO:0009094
Arst3g00068 426 ProSitePatterns Prephenate dehydratase signature 2. 343 350 IPR018528 GO:0004664|GO:0009094
Arst3g00068 426 ProSiteProfiles ACT domain profile. 317 409 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00068 Arst-Chr3 474273 475951 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00068 K05359 - gmx:100809331 692.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01978 8 28257985 28259513 Arst3g00068 3 474273 475951 PCT