Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00050 ATGGAAATAGGAAGCATAACTGAGTTCCTTAAGGATAAGAATGTTTTGGTCATTGGTGCCACGGGCTTCCTTGCAAAAATTTTTATAGAGAAGATACTGAGAGTCCAATCCAATGTGAAGAAACTTTATCTTCTTTTGAGAGCCAAAGATGCTGAATCTGCCACTCGCCGATTGCACAATGAGATTTTAGGGAAGGAATTGTTCAGATTATTGAAGGAAAATGTGGGTGCAAAGTTCAATTTCTTTGTCTCAGAAAAGTTGACTCTTGTTCCTGGAGATATCTCTTATGAAGACTTTAATTTGAAGGACTCCATTCTACGCCAAGAGCTTTACAATGAACTTGATGTTATAGTTAACTTAGCTGCAACAACTAACTTCGACGAAAGATACGATGTTGCATTGGGTTTAAATACATTTGGAGTGAAGCATGTATTAAGCTTTGCCAAAAACTGCACTAAACTGAAGGTGCTTGTCCATGTATCAACAGCATATGTATGTGGGGAGAGAGGAGGAGTGATAGTAGAGGATCCACACAAAATGGGAGTTTCACTAAATGGAGTGCAAGGACTCAACATTGTTGAGGAAAAGAAGATTGTGGAGAACAAGCTGAAGCAACTTCAACAGGATGGAGCCACAGAGGAAGAAATCAAAATCTCCATGAAGGACTTAGGCATGGAAAGAGCAAATGAATATGGATGGCCAAACACATATGTGTTTACAAAAGCAATGGGAGAAATGCTAGTTGAAACTTTAAAAGAAGATATGCCAGTGGTTATTCTACGTCCTACAATCGTTACTAGCACCTACAAAGAACCTTTTCCTGGTTGGGTGGAAGGCGTAAGAACCATCGATAGTTTAATTGTTGCGTATGGTAAAGGAAAATTAACATGCTTCCTTGCGGACCTTAAGAAGGTGTTTGATGTGATACCAGCAGACATGGTAGTGAATGCAATCCTTGCAGCAATGGTGGGTCATGCGAGCAATAATGAAGCATGTGATGAGATGATATATCATGTAGGGTCGTCGATGGCAAATCCAGTGAAATACCATGATCTGCGTGACTATGGATTCAGATATTTCAGCGCAAAACCATGCTTAGACAAGGAAGGAAATGCCATAAGAGTTGGCAAGGTTACGGTATTGGAGAGCATGGCTAGCTTCCAGAGATACTTGTTCATTCGTTACTTGGTTCCATTAAAGGGGTTAGAGCTAGCGAACTTAGCATTTTGCCACTACTTTGAGGGAACCTATGTAGACATCAACAGGAAGATCTCTATTGTTAAGCGTTTGGTTCAACTTTACAGGCCCTACTTGTTCTTCAGTGGCATATTTGATGACATCAACAGAGAGAAATTGCACATGGCAGCTAAGCAAGGTGGAGCAGAGATGGATTTGTATTACTTCGACCCAAAAATCATTGACTGGGAGGACTACTTTATGAATGTCCACTTCCCTGGCATTGTCAAATATGTCTTCAAGTAG 1482 0.4042 MEIGSITEFLKDKNVLVIGATGFLAKIFIEKILRVQSNVKKLYLLLRAKDAESATRRLHNEILGKELFRLLKENVGAKFNFFVSEKLTLVPGDISYEDFNLKDSILRQELYNELDVIVNLAATTNFDERYDVALGLNTFGVKHVLSFAKNCTKLKVLVHVSTAYVCGERGGVIVEDPHKMGVSLNGVQGLNIVEEKKIVENKLKQLQQDGATEEEIKISMKDLGMERANEYGWPNTYVFTKAMGEMLVETLKEDMPVVILRPTIVTSTYKEPFPGWVEGVRTIDSLIVAYGKGKLTCFLADLKKVFDVIPADMVVNAILAAMVGHASNNEACDEMIYHVGSSMANPVKYHDLRDYGFRYFSAKPCLDKEGNAIRVGKVTVLESMASFQRYLFIRYLVPLKGLELANLAFCHYFEGTYVDINRKISIVKRLVQLYRPYLFFSGIFDDINREKLHMAAKQGGAEMDLYYFDPKIIDWEDYFMNVHFPGIVKYVFK 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00050 493 Gene3D - 7 383 - -
Arst3g00050 493 Pfam Male sterility protein 395 493 IPR033640 -
Arst3g00050 493 CDD FAR-N_SDR_e 13 364 - -
Arst3g00050 493 Pfam Male sterility protein 19 318 IPR013120 -
Arst3g00050 493 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 330 IPR036291 -
Arst3g00050 493 PANTHER MALE STERILITY PROTEIN 2-RELATED 6 493 IPR026055 GO:0080019
Arst3g00050 493 CDD FAR_C 393 492 IPR033640 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00050 Arst-Chr3 353049 355816 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00050 110 492 Acyl Lipid Metabolism Gene Families AT4G33790 59.269 2.99e-172 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00050 K13356 - gmx:100788994 766.533