Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00048 ATGGAGTTGGGAAGCATACTCCACTTCCTTGAGGATAAGACCATTCTCATCACTGGAGCCACTGGCTTCCTTGCCAAAATTTTTATAGAGAAGATACTGAGAGTCCAATCCAATGTGAAGAAACTTTATCTTCTTTTGAGAGCCAAAGATGCTGAATCTGCCACTCGCCGATTGCACAATGAGATTTTAGGGAAGGAATTGTTCAGATTATTGAAGGAAAATGTGGGTGCAAAGTTCAATTTCTTTGTCTCAGAAAAGTTGACTCTTGTTCCTGGAGATATCTCTTATGAAGACTTTAATTTGAAGGACTCCATTCTACGCCAAGAGCTTTACAATGAACTTGATGTTATAGTTAACTTAGCTGCAACAACTAACTTCGACGAAAGATACGATGTTGCATTGGGTTTAAATACATTTGGAGTGAAGCATGTATTAAGCTTTGCCAAAAACTGCACTAAACTGAAGGTGCTTGTCCATGTATCAACAGCATATGTATGTGGGGAGAGAGGAGGAGTGATAGTAGAGGATCCACACAAAATGGGAGTTTCACTAAATGGAGTGCAAGGACTCAACATTGTTGAGGAAAAGAAGATTGTGGAGAACAAGCTGAAGCAACTTCAACAGGATGGAGCCACAGAGGAAGAAATCAAAATCTCCATGAAGGACTTAGGCATGGAAAGAGCAAATGAATATGGATGGCCAAACACATATGTGTTTACAAAAGCAATGGGAGAAATGCTAGTTGAAACTTTAAAAGAAGATATGCCAGTGGTTATTCTACGTCCTACAATCGTTACTAGCACCTACAAAGAACCTTTTCCTGGTTGGGTGGAAGGCGTAAGAACCATCGATAGTTTAATTGTTGCGTATGGTAAAGGAAAATTAACATGCTTCCTTGCGGACCTTAAGAAGGTGTTTGATGTGATACCAGCAGACATGGTAGTGAATGCAATCCTTGCAGCAATGGTGGGTCATGCGAGCAATAATGAAGCATGTGATGAGATGATATATCATGTAGGGTCGTCGATGGCAAATCCAGTGAAATACCATGATCTGCGTGACTATGGATTCAGATATTTCAGCGCAAAACCATGCTTAGACAAGGAAGGAAATGCCATAAGAGTTGGCAAGGTTACGGTATTGGAGAGCATGGCTAGCTTCCAGAGATACTTGTTCATTCGTTACTTGGTTCCATTAAAGGGGTTAGAGCTAGCGAACTTAGCATTTTGCCACTACTTTGAGGGAACCTATGTAGACATCAACAGGAAGATCTCTATTGTTAAGCGTTTGGTTCAACTTTACAGGCCCTACTTGTTCTTCAGTGGCATATTTGATGACATCAACAGAGAGAAATTGCACATGGCAGCTAAGCAAGGTGGAGCAGAGATGGATTTGTATTACTTCGACCCAAAAATCATTGACTGGGAGGACTACTTTATGAATGTCCACTTCCCTGGCATTGTCAAATATGTCTTCAAGTAG 1482 0.4082 MELGSILHFLEDKTILITGATGFLAKIFIEKILRVQSNVKKLYLLLRAKDAESATRRLHNEILGKELFRLLKENVGAKFNFFVSEKLTLVPGDISYEDFNLKDSILRQELYNELDVIVNLAATTNFDERYDVALGLNTFGVKHVLSFAKNCTKLKVLVHVSTAYVCGERGGVIVEDPHKMGVSLNGVQGLNIVEEKKIVENKLKQLQQDGATEEEIKISMKDLGMERANEYGWPNTYVFTKAMGEMLVETLKEDMPVVILRPTIVTSTYKEPFPGWVEGVRTIDSLIVAYGKGKLTCFLADLKKVFDVIPADMVVNAILAAMVGHASNNEACDEMIYHVGSSMANPVKYHDLRDYGFRYFSAKPCLDKEGNAIRVGKVTVLESMASFQRYLFIRYLVPLKGLELANLAFCHYFEGTYVDINRKISIVKRLVQLYRPYLFFSGIFDDINREKLHMAAKQGGAEMDLYYFDPKIIDWEDYFMNVHFPGIVKYVFK 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00048 493 PANTHER MALE STERILITY PROTEIN 2-RELATED 6 493 IPR026055 GO:0080019
Arst3g00048 493 Pfam Male sterility protein 395 493 IPR033640 -
Arst3g00048 493 CDD FAR-N_SDR_e 13 364 - -
Arst3g00048 493 Gene3D - 8 383 - -
Arst3g00048 493 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 330 IPR036291 -
Arst3g00048 493 Pfam Male sterility protein 17 318 IPR013120 -
Arst3g00048 493 CDD FAR_C 393 492 IPR033640 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00048 Arst-Chr3 348001 355816 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00048 110 492 Acyl Lipid Metabolism Gene Families AT4G33790 59.269 2.38e-172 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00048 K13356 - gmx:100788994 767.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01998 8 28640325 28642414 Arst3g00048 3 348001 355816 PCT