Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00045 ATGATCCGCCGCCCCCACACGCACCTCAACTCCANNNNNNCCGCCATCCAGATCGCCGATCACAACCTCAACCACGACATCCAGAAGCTCCTCGACGGTAACTTCGCCAGCCAGCTCCGCCTCCGGACCTTCATCTCGTGGCGGCGGATCATCCATCACGACGTCGCCAGCGCCGGAGACAGATCTTCCTCCCGGAGCACCATTCCCGCGACGCTCCGTTCCCCTCTGTTCTACCGTTACTGGCTCGATTTCCGTAAGGCCCTGAACGATTGGGCGAGTAAGAAGCAATTCCAACCGAATATCATGGATGAGCTGATTCAGTTGGTGAAAGCCCCCATTGACAAGAAAAACGGTATCTTGGATGGGAATTTACGAAAATACGGTTCTTGTGCGGTTGTGGGGAACAGCGGGATCCTGTTGAAGAGTGATTATGGTAGGTTGATTGATTCGCATGATGCAGTGATAAGGCTGAACAATGCGAGGGTGAATAACTTTGAGAACAAGGTTGGGAAGAAGACAACAATATCATTTGTGAATAGCAACATTGTGCACCTGTGTGCCAGAAGAGTTGGATGCTATTGCCACCCTTATGGGCCTCACATCCCCATTGTTATGTATATTTGTCAGGCCGTCCACTTTCTGGATTTCACTGTCTGCAATGCTTCCCACAAGGCTCCCCTCTTGGTAACTGATCCCAGGTTTGATGTCTTGTGCGCAAGGATTGTCAAGTATTATTCATTGAAGAGGTTTGTGGAGGAAAGTGGCAAGACCTTGGAGGAGTGGGGGAGTGCCCATGATGGGGCTCTCTTCCATTACTCTTCTGGATTGCAGGCCGTCATGCTTGCTCTGGGCATTTGTGACAAAGTTAGCATCTTTGGATTTGGTAAATCAGCTTCTGCCAAACACCATTATCATACCAACCAGAAGGCTGAGCTCCATTTGCACGATTACGAGGCTGAGTATCAGTTCTACCGCGACCTTGTTGATCGCCACAACCCTATACCATTCCTCTCAGACAACTTCAACCTCCCTCCTGTTGTTTTATATCACTGA 1053 0.4976 MIRRPHTHLNSXXXAIQIADHNLNHDIQKLLDGNFASQLRLRTFISWRRIIHHDVASAGDRSSSRSTIPATLRSPLFYRYWLDFRKALNDWASKKQFQPNIMDELIQLVKAPIDKKNGILDGNLRKYGSCAVVGNSGILLKSDYGRLIDSHDAVIRLNNARVNNFENKVGKKTTISFVNSNIVHLCARRVGCYCHPYGPHIPIVMYICQAVHFLDFTVCNASHKAPLLVTDPRFDVLCARIVKYYSLKRFVEESGKTLEEWGSAHDGALFHYSSGLQAVMLALGICDKVSIFGFGKSASAKHHYHTNQKAELHLHDYEAEYQFYRDLVDRHNPIPFLSDNFNLPPVVLYH 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00045 350 Coils Coil 307 327 - -
Arst3g00045 350 Gene3D Glycosyl transferase family 29 23 333 IPR038578 -
Arst3g00045 350 Pfam Glycosyltransferase family 29 (sialyltransferase) 95 330 IPR001675 GO:0006486|GO:0008373
Arst3g00045 350 PANTHER BETA-1,6-GALACTOSYLTRANSFERASE GALT29A 14 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00045 Arst-Chr3 324215 325526 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00045 125 334 Glycosyltransferase AT3G48820 26.047 1.88e-13 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00045 K00786 - gmx:100789506 522.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g00045 3 324215 325526 Arst3g00045 3 324215 325526 ECH