Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g03043 ATGCAGGAAATAAGTTTGGAAGCCAGAACTAAAAAAAATGTACTTGTGTTGTTTTTTCGAATGAAAGATACATTGAGGTGTTGGGTTAGTTTCTTTTCTATAGGGTTGATTTCAGTGTTGTATAACATAAATATATCAACTTGTAGTTCACTCTTTTCTCCTTCTGCTCATTGCAGCTATCAGTGGATAAAGCGGAAGGGAAGACCTGCACCAAGGGAAGTTGCACCGATAATTGTATCTAATCACGTATCCTACATTGAACCTATCTTCTATTTCTATGAATTATTTCCAACCATTGTAGCATCAGAGTCTCATGATGCACTACCTTTTGTTGGCACCATTATTAGAGCAATGCAGGTCATATATGTCGACAGGTTCTCACCATCATCAAGAAAACATGCCGTCAAGGAAATAAAGAGAAGGGCTTCCTGCAATAGATTTCCTCGAGTACTGCTATTTCCTGAGGGAACCACAACTAATGGCAGGAGCCTTATCTCCTTCCAACTTGGTGCATTCATCCCCGGTTACCCAATCCAGCCTGTAATTGTTCGCTATCCTCATGTACACTTTGATCAATCTTGGGGTAATGTTTCTTTGGGAAAGCTTATGTTCAGGATGTTCACTCAATTCCACAACTTCTTCGAGGTAGAATATCTTCCTGTCATTTCACCCCTGCATGATAAAGAAACTGCAGTCCACTTTCGTGAGAGGGCTTGCCGTGCTATTGCATCTGCGATGAACGTTGTCCAAACTGGACACACTTATGGAGACATAATGCTTTATATGAAAGCACAAGAAGCAAAACAGGAAAACCCCTCAAGTTTTATGGTTGAAATGGCGACGCTGGAATCATTATTTCATATCAGAAGCTTGGAAGCTGTTGAATTCCTAGATAAATTCTTGGCTATGAATCCTGATCCCAGCGGTCGAGTTCAATATCATAACTTCTTGAAGGTTTTAAGACTTAAGGCATGCCCTTTATCCGAAAAGATGTTTGCATTCATTGATGTGGAGAAGTGCGGCTCAATAACGTTTAGACAGTTCTTGTACGGATCTTCTTACGTCATGAAGCATCGAGGATTCCATCAAGCTTGCGAAGAAGCATTTGCGGAATGCAGCAGTGCAGTAAAGGGCTACATTGTAGAACAAGAATTGCAAGACTTCATGCAACATGCCATCCCAAGCTGGAATGAGAATGAGGTTCATGAGCTTTTTATGTTATTTGATGATGACAATGATGGAAGAATAACCAAGGATGATTTTCATTCATGCCTCAAGAAAAACCCTCTTCTCATTGCATTTCTTACACCTCACCTTCAACACAAGGAGTGTGGTGGCAATAATGGAGTTCTAGAAATAGTATGA 1365 0.4037 MQEISLEARTKKNVLVLFFRMKDTLRCWVSFFSIGLISVLYNINISTCSSLFSPSAHCSYQWIKRKGRPAPREVAPIIVSNHVSYIEPIFYFYELFPTIVASESHDALPFVGTIIRAMQVIYVDRFSPSSRKHAVKEIKRRASCNRFPRVLLFPEGTTTNGRSLISFQLGAFIPGYPIQPVIVRYPHVHFDQSWGNVSLGKLMFRMFTQFHNFFEVEYLPVISPLHDKETAVHFRERACRAIASAMNVVQTGHTYGDIMLYMKAQEAKQENPSSFMVEMATLESLFHIRSLEAVEFLDKFLAMNPDPSGRVQYHNFLKVLRLKACPLSEKMFAFIDVEKCGSITFRQFLYGSSYVMKHRGFHQACEEAFAECSSAVKGYIVEQELQDFMQHAIPSWNENEVHELFMLFDDDNDGRITKDDFHSCLKKNPLLIAFLTPHLQHKECGGNNGVLEIV 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g03043 454 SMART plsc_2 76 186 IPR002123 GO:0016746
Arst2g03043 454 CDD LPLAT_LPCAT1-like 58 259 IPR045252 GO:0008374
Arst2g03043 454 ProSiteProfiles EF-hand calcium-binding domain profile. 396 431 IPR002048 GO:0005509
Arst2g03043 454 SMART efh_1 364 392 IPR002048 GO:0005509
Arst2g03043 454 SMART efh_1 400 428 IPR002048 GO:0005509
Arst2g03043 454 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 70 252 - -
Arst2g03043 454 CDD EFh 365 421 IPR002048 GO:0005509
Arst2g03043 454 ProSitePatterns EF-hand calcium-binding domain. 409 421 IPR018247 -
Arst2g03043 454 Gene3D - 278 431 - -
Arst2g03043 454 Pfam Acyltransferase 74 180 IPR002123 GO:0016746
Arst2g03043 454 PANTHER PHOSPHOLIPID ACYLTRANSFERASE 58 278 - -
Arst2g03043 454 SUPERFAMILY EF-hand 285 439 IPR011992 -
Arst2g03043 454 Pfam EF-hand domain pair 378 427 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g03043 Arst-Chr2 88174809 88179656 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g03043 63 261 Acyl Lipid Metabolism Gene Families AT1G80950 34.300 6.57e-29 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g03043 K13510 - gmx:100818109 665.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst2g03043 2 88174809 88179656 Arst2g03043 2 88174809 88179656 ECH