Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g02968 ATGTTACACTCACAGGTTTCCTTCAAGATCCTGCAACGGTTTCCATTACAATCATTATTCAAACATGGGTCGAAGTTTTTACACTCACTCAAACATGAACACCAGGTGTTCGATCATATTCCTCTCCCAAAAGTTGCATCGATTAAGCGTTCCATGCTTACCCTTTTGCACAACAACCTTCCCTTTCATGCCCTATTTGTATTCAAGACCCAGTTCCAGCTGTGTTCGCTCGACTGTGTTGATGAGGTCGGTGTTGCCTTGGCTCTCAAGGCTTGTCAAGGAGAGCTGAAACTTGGGTGCCAACTCCATGGTTTTGCAGTGTCCAGCGGGTTCATTTCGTTGGTCACCGTGTCAAATTCGCTGATGAAGATGTACTGCAAGTCAGGGAATTTTCGGAAGGCCTTGCGTGTGTTTGAGAATTTGAGTTGCCCTGACATTGTTTCTTGGAACACTGTGCTTTCAGGGTTCGAGGAAAACATGGATGCTTTGAGTTTTGCTTGTTCTATGCATTCAAATGGGATCGTGTTTGATCCTGTGACATACACCACTGCTCTTGCCTTTTGTTGGGGTGATCATGGGTTTTGTTTTGGGAGCCAATTGCATTCTCTTGTTGCAAAATTTGGATTCAATTGTGAAGTTTTCGTAGGGAATGCTCTGATAACCATGTATTCAAGGTCAGGGAGTTTAGCTGAGGCTAGGAGGGTGTTTGATGAGATGCCCCGGAAGGATTTGGTTTCATGGAGTGCAATGCTTTCGGGTTATGCTCAAGAGGGGGAATGTTATGGGCTGGAAGCAGTTTCACTGTTTGTTAGCATGGTTAGGCAAGGGATGTCCCTTGACCATGTCTCGTTTACAGGTGCAGTTTCAGCTTGTGGTTATATGAAAAACTTAGAGCTAGGGAGGCAGATACATGGTTTGACACTTAAAGTGGGGTATGGAACACATGTTTCGGTTTGCAATGTGTTGATCTCGACTTATTTGAAGTGTGAGGTCGGCAGAGATGCAAAACTGGTTTTTCAGCTGATGAATAATCGGAATGTAGTCTCTTGGACGACAATGATTTCAATTGAAGAAGAAGATGCAGTGTCTCTTTTCAATGAGATGAGAAAAGACGGTGTATATCCAAATGATATTACATTTATAGGACTATTACATTCTATTACACTCAATAATCTGGTGGTGGAAGGTGAAATGATTCATGGATTATGCATCAAAAGCAGCTTCTTGTCGGAACCAAATGTCTCCAATAGCCTTATTACCATGTATGCCAAGTTTGAATCTGTTCAAGAATCGAAGAAAATTTTTGAGGAGGTTAACCATAGAGAGATAATAGCATGGAATTCATTAATTTCAGGGTATGCTCAGAATAGCTTATTCAAAGATGCTTTCCTTACATTTTTGGCTGCAGTGAATGAGGTAAAACCAAACCAATACACTTTTGGCAGTGTCTTAAATGCTATTGCTGCTGCTGAGGATATATCTTTGAAACATGGGCAACGATGCCATTCGGAATTGATCAAACGTGGGTTAGACACTGATCCGATTGTTTCAGGTTCTCTGCTTGACATGTATGGCAAGCGTGGGAGCATAGCCGAGTCTCAAAGAGTATTTGACGAGACACCTAGAAAAAGTGAGTTTGCTTGGACTGCAATAGTATCAGCCTATGCTCGACATGGGGACTATGAGTCAGTGATGAGTTTGTTTAAGGAGATGGAGAGTGAAGGAACCACTCCTGACTCCATCACTTTCCTTTCCGTTTTAGCTGCATGTTGTAGAAAAGGCATGGTTGATGTAGGCCATAGAGTCTTTGACTCCATGGTGAAAGAACATTCAATTGAACCAACTCCAGAACATTATTCTATCATGGTGGACATGTTAGGTCGCGCAGGACTGCTAAATGAGGCAGCAGAGTTGATGCACCAGATTCCAGGAGGACCTAGATTGTCAGTGTTGCAAAGCTTGCTTGGTTCTTGTAGAATACATGGGAATATAGAGATGGCTGAGAGGGTTATTGATAGGTTGGTTGAAATGGATCCTGCGAGTTCAGGTTCATATGTATTAATGGCGAACTTATACGCTGAGAAAGGGAAATGGGAGAAAGTAGCTGAAGTGAGGAAACTTATGAGACAGAGGGGAGTGAAGAAGGAAGTTGGGTTTAGTTGGGTGGACGTTGGTGGTATTAATTCCTTGTATTTGCATGGTTTCTCTTCCGGGGATAAGTCGCACCCGGAATCTGAGGATATTTGTAACATGGCAGAGTTTATTGGATTGCAAATGAAAGTTTTGAAAGGGAGCAAAGCAAGGGAAGGAGACTGGCATCAGGAATAG 2328 0.4274 MLHSQVSFKILQRFPLQSLFKHGSKFLHSLKHEHQVFDHIPLPKVASIKRSMLTLLHNNLPFHALFVFKTQFQLCSLDCVDEVGVALALKACQGELKLGCQLHGFAVSSGFISLVTVSNSLMKMYCKSGNFRKALRVFENLSCPDIVSWNTVLSGFEENMDALSFACSMHSNGIVFDPVTYTTALAFCWGDHGFCFGSQLHSLVAKFGFNCEVFVGNALITMYSRSGSLAEARRVFDEMPRKDLVSWSAMLSGYAQEGECYGLEAVSLFVSMVRQGMSLDHVSFTGAVSACGYMKNLELGRQIHGLTLKVGYGTHVSVCNVLISTYLKCEVGRDAKLVFQLMNNRNVVSWTTMISIEEEDAVSLFNEMRKDGVYPNDITFIGLLHSITLNNLVVEGEMIHGLCIKSSFLSEPNVSNSLITMYAKFESVQESKKIFEEVNHREIIAWNSLISGYAQNSLFKDAFLTFLAAVNEVKPNQYTFGSVLNAIAAAEDISLKHGQRCHSELIKRGLDTDPIVSGSLLDMYGKRGSIAESQRVFDETPRKSEFAWTAIVSAYARHGDYESVMSLFKEMESEGTTPDSITFLSVLAACCRKGMVDVGHRVFDSMVKEHSIEPTPEHYSIMVDMLGRAGLLNEAAELMHQIPGGPRLSVLQSLLGSCRIHGNIEMAERVIDRLVEMDPASSGSYVLMANLYAEKGKWEKVAEVRKLMRQRGVKKEVGFSWVDVGGINSLYLHGFSSGDKSHPESEDICNMAEFIGLQMKVLKGSKAREGDWHQE 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g02968 775 NCBIfam pentatricopeptide repeat 119 140 IPR002885 -
Arst2g02968 775 NCBIfam pentatricopeptide repeat 217 244 IPR002885 -
Arst2g02968 775 NCBIfam pentatricopeptide repeat 547 579 IPR002885 -
Arst2g02968 775 NCBIfam pentatricopeptide repeat 581 615 IPR002885 -
Arst2g02968 775 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 544 578 IPR002885 -
Arst2g02968 775 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 243 279 IPR002885 -
Arst2g02968 775 Gene3D Tetratricopeptide repeat domain 297 400 IPR011990 GO:0005515
Arst2g02968 775 Gene3D Tetratricopeptide repeat domain 198 296 IPR011990 GO:0005515
Arst2g02968 775 Gene3D Tetratricopeptide repeat domain 401 503 IPR011990 GO:0005515
Arst2g02968 775 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 29 160 IPR046960 GO:0003723|GO:0009451
Arst2g02968 775 FunFam Pentatricopeptide repeat-containing protein mitochondrial 515 741 - -
Arst2g02968 775 FunFam Pentatricopeptide repeat-containing protein mitochondrial 355 498 - -
Arst2g02968 775 Gene3D Tetratricopeptide repeat domain 518 727 IPR011990 GO:0005515
Arst2g02968 775 Gene3D Tetratricopeptide repeat domain 78 189 IPR011990 GO:0005515
Arst2g02968 775 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 212 242 IPR002885 -
Arst2g02968 775 Pfam PPR repeat 618 641 IPR002885 -
Arst2g02968 775 Pfam PPR repeat 217 243 IPR002885 -
Arst2g02968 775 Pfam PPR repeat 445 466 IPR002885 -
Arst2g02968 775 Pfam PPR repeat 416 438 IPR002885 -
Arst2g02968 775 Pfam PPR repeat 349 373 IPR002885 -
Arst2g02968 775 Pfam PPR repeat 245 276 IPR002885 -
Arst2g02968 775 Pfam PPR repeat 119 139 IPR002885 -
Arst2g02968 775 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 681 715 IPR002885 -
Arst2g02968 775 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 579 614 IPR002885 -
Arst2g02968 775 SUPERFAMILY TPR-like 506 681 IPR011990 GO:0005515
Arst2g02968 775 Pfam E motif 661 723 IPR046848 -
Arst2g02968 775 FunFam Pentatricopeptide repeat-containing protein, mitochondrial isoform A 44 193 - -
Arst2g02968 775 Pfam PPR repeat family 544 592 IPR002885 -
Arst2g02968 775 FunFam Pentatricopeptide repeat-containing protein, mitochondrial 197 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g02968 Arst-Chr2 87257630 87260157 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g02968 80 748 Glycoside Hydrolase AT3G49170 31.503 2.26e-113 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g02968 - - cam:101513383 1172.15