Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g02948 ATGTTGCAACCTTTCACACCCTTCTTTTCCTTTCTTCATAGAAAATCCAAATCACTCCTCAACCTCCCAAAACCAGCACCGAGTAGTAGTTGCTGTTCATGCTGGTGCTGGAGAAGACAGCGACCCAGAAGAAAATTCTCACCAAGTTTTGATTTTGATGAATTCTCAGCGTCTTTCATAGACATGAATCTGTCAAGGCAGTTCCAACAAGTGTTCAAGCTCATTGATTCCAATGGTGATGGAAAAATCTCAACCACTGAGCTCAGTGAAACTCTTCTATGTCTTGGATACAACAAGTGCATGGCTAAAAAAGAAGCTGAGAGAATGGTGAGAGCTTTGGACTTTAATGGAGATGGGTTTGTTGACTTTGATGAATTCATGGTTGTGATGAGAGAAGGAATAGCAACAACAGAAGAAGAAGAAGAAGGTGGCAAGAATAATAACAATAATAATATTGATCAAGATGAGTATCTTATGGATGCTTTTCATGTGTTTGATTCTGATAAGAATGGATTAATCTCTGCTAAGGAATTGAGGAGAGTTTTGGTTAATCTTGGGTGTGATCGTTGCAGCATCAGAGAGTGTAAGCGTATGATCAAAAGTGTTGACAAGAATGGTGATGGGTTTGTTGATTTTGATGAATTTAGATCCATGATGAAAAAGGGACTTTCCAAATCCAAACAAAATTAG 690 0.3841 MLQPFTPFFSFLHRKSKSLLNLPKPAPSSSCCSCWCWRRQRPRRKFSPSFDFDEFSASFIDMNLSRQFQQVFKLIDSNGDGKISTTELSETLLCLGYNKCMAKKEAERMVRALDFNGDGFVDFDEFMVVMREGIATTEEEEEGGKNNNNNNIDQDEYLMDAFHVFDSDKNGLISAKELRRVLVNLGCDRCSIRECKRMIKSVDKNGDGFVDFDEFRSMMKKGLSKSKQN 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g02948 229 CDD EFh 67 131 IPR002048 GO:0005509
Arst2g02948 229 ProSiteProfiles EF-hand calcium-binding domain profile. 190 225 IPR002048 GO:0005509
Arst2g02948 229 Pfam EF-hand domain pair 156 220 IPR002048 GO:0005509
Arst2g02948 229 Pfam EF-hand domain pair 67 131 IPR002048 GO:0005509
Arst2g02948 229 SUPERFAMILY EF-hand 66 221 IPR011992 -
Arst2g02948 229 ProSitePatterns EF-hand calcium-binding domain. 76 88 IPR018247 -
Arst2g02948 229 ProSitePatterns EF-hand calcium-binding domain. 166 178 IPR018247 -
Arst2g02948 229 ProSiteProfiles EF-hand calcium-binding domain profile. 63 98 IPR002048 GO:0005509
Arst2g02948 229 FunFam calmodulin-like protein 3 151 223 - -
Arst2g02948 229 ProSitePatterns S-100/ICaBP type calcium binding protein signature. 109 130 IPR001751 -
Arst2g02948 229 Gene3D - 44 146 - -
Arst2g02948 229 CDD EFh 157 220 IPR002048 GO:0005509
Arst2g02948 229 Gene3D - 147 229 - -
Arst2g02948 229 SMART efh_1 105 133 IPR002048 GO:0005509
Arst2g02948 229 SMART efh_1 157 185 IPR002048 GO:0005509
Arst2g02948 229 SMART efh_1 194 222 IPR002048 GO:0005509
Arst2g02948 229 SMART efh_1 67 95 IPR002048 GO:0005509
Arst2g02948 229 ProSiteProfiles EF-hand calcium-binding domain profile. 153 188 IPR002048 GO:0005509
Arst2g02948 229 ProSiteProfiles EF-hand calcium-binding domain profile. 101 136 IPR002048 GO:0005509
Arst2g02948 229 ProSitePatterns EF-hand calcium-binding domain. 203 215 IPR018247 -
Arst2g02948 229 ProSitePatterns EF-hand calcium-binding domain. 114 126 IPR018247 -
Arst2g02948 229 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 146 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g02948 Arst-Chr2 87085934 87086820 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g02948 158 226 EF-hand Containing Proteins AT1G24620 33.333 7.17e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g02948 - - gmx:100799475 253.062