Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g02726 ATGGCTACAGCTACTGAAGTATTTACTGAGAAACCACTTCAAGGTGTTCCAATCCTTGCAAGAGAGCCTAGTTTCTCATCTTCACCAAGAAGGTTGGAAGGAAAAGTTGCTATTGTGACCGGTGGTGCTAAAGGGATAGGAGAAGCAACAGTGAGAATCTTTGTGAAGCATGGTGCAAAAGTTGTAATTGGTGATGTGGAAGATGAACTTGGAAAGTTGCTAGCTGAGGCATTATCCCCTTCAGTAAGCTATGTACATTGTGATGTTAGCAATGAAGAAGAAGTTGAGAATTTGGTGAATTACACAATCTCAGTGTATGGTCAACTTGACATAATGTTTAACAATGCTGGGATATTAGGGAACCAATCAAAGAACAAGAAGAGCATAGTCAACTTTGACCCTAATGAGTTTGACCAAGTTATGAGTGTTAATGTTAAGGGTATGGCCTTGGGGATTAAGCATGCAGCTAGGGCTATGATCCCTAGAGGAATTAAGGGTTGCATTATTTCAACTTCTAGTGTGGCTGGTGTTATGGGGGGTTTAGGGCCACATGCTTATACAGCTTCTAAGCATGCCATTGTTGGACTCACTAAGAACACTGCTTGTGAGTTAGGGAGGTATGGAATTAGGGTTAATTGTATTTCACCATTTGGGGTTGCCACATCCATGCTTGTTAATGCATGGAGAAATTGTGATGATAATGATGATGATGATGGAATTAATTTTGGGTTGCCTTCAATTGAGGAAGTTGAGAAAATGGAAGGGTTTGTGAGAGGTTTGGCTAATTTGCAATGTACAAATTTAAGGCCTAGGGATATTGCTGAGGCAGCACTTTATCTTGCTAGTGATGAATCTAAGTATGTTAGTGGTCATAATCTTGTTGTGGATGGTGGTGTCACCTCCTCAAGAAATTGCATTGGTTTGTAA 927 0.4045 MATATEVFTEKPLQGVPILAREPSFSSSPRRLEGKVAIVTGGAKGIGEATVRIFVKHGAKVVIGDVEDELGKLLAEALSPSVSYVHCDVSNEEEVENLVNYTISVYGQLDIMFNNAGILGNQSKNKKSIVNFDPNEFDQVMSVNVKGMALGIKHAARAMIPRGIKGCIISTSSVAGVMGGLGPHAYTASKHAIVGLTKNTACELGRYGIRVNCISPFGVATSMLVNAWRNCDDNDDDDGINFGLPSIEEVEKMEGFVRGLANLQCTNLRPRDIAEAALYLASDESKYVSGHNLVVDGGVTSSRNCIGL 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g02726 308 Gene3D - 24 306 - -
Arst2g02726 308 CDD secoisolariciresinol-DH_like_SDR_c 31 300 IPR045309 GO:0016616
Arst2g02726 308 Pfam Enoyl-(Acyl carrier protein) reductase 247 300 - -
Arst2g02726 308 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 28 303 - -
Arst2g02726 308 FunFam Short-chain dehydrogenase reductase 23 304 - -
Arst2g02726 308 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 33 300 IPR036291 -
Arst2g02726 308 PRINTS Glucose/ribitol dehydrogenase family signature 186 205 IPR002347 -
Arst2g02726 308 PRINTS Glucose/ribitol dehydrogenase family signature 207 224 IPR002347 -
Arst2g02726 308 PRINTS Glucose/ribitol dehydrogenase family signature 107 118 IPR002347 -
Arst2g02726 308 PRINTS Glucose/ribitol dehydrogenase family signature 263 283 IPR002347 -
Arst2g02726 308 PRINTS Glucose/ribitol dehydrogenase family signature 160 176 IPR002347 -
Arst2g02726 308 PRINTS Glucose/ribitol dehydrogenase family signature 36 53 IPR002347 -
Arst2g02726 308 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 186 205 IPR002347 -
Arst2g02726 308 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 166 174 IPR002347 -
Arst2g02726 308 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 107 118 IPR002347 -
Arst2g02726 308 Pfam short chain dehydrogenase 35 228 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g02726 Arst-Chr2 83744901 83746580 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g02726 32 300 Miscellaneous Gene Families AT2G29330 27.899 2.37e-24 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g02726 - - gmx:100790562 491.886