Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g02562 ATGGCAACATGGGTCTTATCAGAATGTGGGTTAAGGCCTCTTCCCCCAATGTTCCCTAGACCAAGAACTGGATCCATTTCATGCACCAAATCTTCTTCTATAAACTCCACATTCTTATCCTCAGATCTGAAGAGCTTCCAACAACAAACAAGGTTCCAATGTTGTAGTTTTAAGGAGAGAAGAAGAAGCTGGGAGATTAAGGTTAGTGTACCTTTAAGGGTTGGCACCATTGAGGAGGAAGAAGAAGAAGAAGGAATCATCAATGGTGTTGTTGAAAAAAGAGAAGTTTGTGAATTTGACCCTGGTGCACCACCACCATTCAAATTGAGTGACATAAGAGCAGCAATACCTAAGCACTGTTGGGTGAAGGATCCATGGAGGTCAATGAGTTATGTTGTGAGAGATGTTGTTGTTGTTCTTGGTTTGGCGGCTGCTGCTGCACACCTCAACAATTGGATTGTTTGGCCTCTCTATTGGGCTGCTCAAGGAACCATGTTTTGGGCACTTTTTGTTCTTGGTCATGATTGTGGTCATGGAAGCTTCTCAAACAATCCCAAACTGAACAGTGTTGTTGGACATTTGCTGCATTCTTCAATTCTAGTACCATATCATGGATGGAGAATTAGTCATAGAACTCATCATCAAAACCATGGCCATGTTGAAAATGATGAATCTTGGCACCCGCTGCCTGAAAAAATCTTCAAGAGCTTGGACAATGTAACACGTACCTTAAGATTCACAATACCTTTTCCAATGCTTGCATATCCTATATACCTTTGGAGCAGAAGTCCTGGGAAGACAGGTTCTCACTTTCATCCAGATAGTGACTTGTTTGTCTCAAATGAGAGAAAAGATGTTATCACTTCAACAATTTGTTGGGCAGCCATGGCTTCTTTGCTAGTTGGGTTAGGGTTTGTGATGGGTCCAATCCAATTGCTTAAGCTTTATGGCATTCCTTACGTGCTTTTTGTTATGTGGTTGGACTTTGTTACTTATTTGCATCACCATGGCCATGAAGACAAATTACCATGGTACCGTGGAGAGGAATGGAGCTACCTTAGGGGCGGGCTTACAACTCTTGATCGTGACTATGGTTGGATTAATAATATTCACCATGATATTGGAACTCATGTCATACATCATCTCTTTCCTCAAATTCCCCATTATCACTTAATAGAAGCAACTGAAGCAGCAAAGCCAGTTCTTGGAAAGTATTACCGAGAGCCAAAGAAATCTCTACCTCTTCCATTTCACCTTATTGGAGATTTGATGAGAAGCATGAAGAAAGATCATTATGTTAGTGACACTGGTGATGTTGTTTATTACCAAACAGACCCTACACTTGGTGGCTCTTCTACATCAATTTAA 1368 0.4115 MATWVLSECGLRPLPPMFPRPRTGSISCTKSSSINSTFLSSDLKSFQQQTRFQCCSFKERRRSWEIKVSVPLRVGTIEEEEEEEGIINGVVEKREVCEFDPGAPPPFKLSDIRAAIPKHCWVKDPWRSMSYVVRDVVVVLGLAAAAAHLNNWIVWPLYWAAQGTMFWALFVLGHDCGHGSFSNNPKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLPEKIFKSLDNVTRTLRFTIPFPMLAYPIYLWSRSPGKTGSHFHPDSDLFVSNERKDVITSTICWAAMASLLVGLGFVMGPIQLLKLYGIPYVLFVMWLDFVTYLHHHGHEDKLPWYRGEEWSYLRGGLTTLDRDYGWINNIHHDIGTHVIHHLFPQIPHYHLIEATEAAKPVLGKYYREPKKSLPLPFHLIGDLMRSMKKDHYVSDTGDVVYYQTDPTLGGSSTSI 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g02562 455 Pfam Domain of unknown function (DUF3474) 1 144 IPR021863 GO:0016717
Arst2g02562 455 Pfam Fatty acid desaturase 153 406 IPR005804 GO:0006629
Arst2g02562 455 PANTHER OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC 93 444 IPR012171 GO:0016491
Arst2g02562 455 CDD Delta12-FADS-like 123 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g02562 Arst-Chr2 81322286 81326402 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g02562 1 451 Lipid Metabolism Gene Families AT3G11170 70.732 0.0 652
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g02562 K10257 - gmx:100217335 761.14