Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g00684 ATGTTGCATAGACGCACATTCTCGTTCTTCTTCTTCATTACGACTACTCTTGTCCTCATGACATTCACATCATCACATTCACTTGCGCATTCTATTGCCATCTCTTCAAGATCAATGGCAGACATGGAAAGGTTCAGCAATGCTGGGAGAGGCAGCAACATCACCGGAATATCAGAGTTCAAGAGATATCTATGGCGTTTCGGGTACCTCGACCATAATGTTAATACCACATGTAATTGTTTCAGCGACGAGTTTGACGCCATGTTAGAATCTGCTCTCGTTAGATACCAACGCAAGCTTGGACTCCAAGTCACTGGCAAGCTCGATTCCATCACCATTTCTGAGATGATCACACCGAGATGCGGAGTTCCAGACAGTAATGATCACACTCACACACACACACACATGCACTCCGCAAAGAACTTCGTGTATTTTCCGGGGAAGCCACGGTGGTCGGGTCCAATGCCGACGACACTCACCTACGCTTTCTCCCCTGAATACACCATCCACACCTTGACCCTTCGCCAGATCCGGAGAGCGTTCCGACGCGCCTTCACGCGCTGGTCTAACGTCATTCCTCTCACATTTGTGGAATCAGACGACTACGGTTTTGCTGAGATCAAGATAGGGTTTTACAGCGGCGACCACGGCGATGGCGAGGCTTTCGACGGGGTTCTTGGAGTGCTGGCGCATTCATTCTCGCCGGAGAGCGGGCGGCTACACCTGGATGCGGCGGAGACGTGGGCAGTGGACTTCGGGGAGAGTTGGTCGGAGGTAGCGGTGGATTTGGAGTCCGTGGCAACGCACGAGATTGGACACGTGCTTGGTCTGTCTCACAGTTCGGTTAGAGAGGCAGTTATGTATCCCAGCTTGAGGCCGAGAGAGAAGAGATATCGTCTCCATATTGATGACGTCATGGGAGTCCAATCTCTTTATGGCTCCAACCCTCATTTCAGATCTTCTGATATCTCGTCGCTTCAATCTGCTATCTCCGCAAATCATGCTCCTCCTCGCTTTCCACCATTCAGTATTCTTCTCTCTTGTGCATACCTTTTGTCTTTCTTTATAATTTTTTCCAGAGGATACAAGCACGTGACTTGA 1101 0.4986 MLHRRTFSFFFFITTTLVLMTFTSSHSLAHSIAISSRSMADMERFSNAGRGSNITGISEFKRYLWRFGYLDHNVNTTCNCFSDEFDAMLESALVRYQRKLGLQVTGKLDSITISEMITPRCGVPDSNDHTHTHTHMHSAKNFVYFPGKPRWSGPMPTTLTYAFSPEYTIHTLTLRQIRRAFRRAFTRWSNVIPLTFVESDDYGFAEIKIGFYSGDHGDGEAFDGVLGVLAHSFSPESGRLHLDAAETWAVDFGESWSEVAVDLESVATHEIGHVLGLSHSSVREAVMYPSLRPREKRYRLHIDDVMGVQSLYGSNPHFRSSDISSLQSAISANHAPPRFPPFSILLSCAYLLSFFIIFSRGYKHVT 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g00684 366 Gene3D Collagenase (Catalytic Domain) 49 318 IPR024079 GO:0008237
Arst2g00684 366 SUPERFAMILY PGBD-like 49 125 IPR036365 -
Arst2g00684 366 SMART col_5 147 314 IPR006026 GO:0006508|GO:0008237|GO:0008270
Arst2g00684 366 CDD ZnMc_MMP 150 313 IPR033739 GO:0008237|GO:0008270
Arst2g00684 366 Pfam Matrixin 156 313 IPR001818 GO:0004222|GO:0006508|GO:0008270|GO:0031012
Arst2g00684 366 ProSitePatterns Matrixins cysteine switch. 119 126 IPR021158 GO:0004222|GO:0006508|GO:0008270|GO:0031012
Arst2g00684 366 Pfam Putative peptidoglycan binding domain 57 114 IPR002477 -
Arst2g00684 366 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 143 315 - -
Arst2g00684 366 PANTHER MATRIX METALLOPROTEINASE 43 314 - -
Arst2g00684 366 FunFam Metalloendoproteinase 1 47 318 - -
Arst2g00684 366 PRINTS Matrixin signature 116 129 IPR021190 GO:0004222|GO:0006508|GO:0008270
Arst2g00684 366 PRINTS Matrixin signature 300 313 IPR021190 GO:0004222|GO:0006508|GO:0008270
Arst2g00684 366 PRINTS Matrixin signature 266 291 IPR021190 GO:0004222|GO:0006508|GO:0008270
Arst2g00684 366 PRINTS Matrixin signature 181 196 IPR021190 GO:0004222|GO:0006508|GO:0008270
Arst2g00684 366 PRINTS Matrixin signature 205 233 IPR021190 GO:0004222|GO:0006508|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g00684 Arst-Chr2 7174511 7177029 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g00684 - K07999 gmx:100781237 420.624