Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g00617 ATGGATGTAGTAGACAAGACATTTTCTGATATTGTCAACGTCATCAAATCATGGATTCCCAGGCGATCCGAACCAGCAAATGTGTCCAGGGATTTTTGGATGCCTGATCAGAGTTGTAGGGTATGCTACGATTGTGATTCCCAGTTCACCTTATTCAATCGAAGGCACCACTGTCGCCTTTGTGGACGAATTTTCTGTAACAAGTGTACTGCAAACTCAATTCCTGCTCCAGTTACCAGCCAGATCAATCCTTGGGATGAGTGGGAAAAGATTCGCGTATGCAATTTTTGTTACAAGCAATGGGAGCAAGGAGTAGTTGCTTTTAATAACAATACACAGGTTTCCAATCTGGATTGCAGTGCTACATTATCAACTTTGAGCTCGGTTAGCAGTAAAACCAGTGTTACTGCTGACAGTACTAATATTACTCTTTTCTCCATGCCTTATTCAGCCGGGCCTTATCAACAAATGCAACAGGGTCCGTGTCTGAACTTGCATCAGTCTCCTATGAGTGGAAACAACACTGATAGGGAAGTTTTATCACCTCCATTAGGGGGGAGGAATGATCTTGCAGGAGACATAGGGGATCCATTACAAAAGCAATTTGAATTCCCTATGAACAGGAGTGATGATGAGGATGAGTATGGTGTATATCAGTTAGACTCTGAGATGAGACATTATCCTCAGGTGAATATCTACTATGGACAGGCTGAGTTTGAAGGAATAAGCAACACTGATGGCTCGCAGAAAGTGCATCCTGATGCAGATAACGGTAATGCAAATCTCACTTCAGAGAATGGATTCGACACACAGGGTTTAGAAAGAAACACAGCAGTTGGGAAGAGTGAGGATGAACCTTATATATATGAAAATGAAGCACCTTCCTCACTATATGTTTCAGAAGATGTTGATGCTGAACCTGTTGATTTTGAAAATAATGGACTTCTCTGGCTCCCTCCTGAACCAGAAGATGCAGAAGACGAGCGAGAAACTTTTTTTGTTGATGAAGATGATGAAGATAATGACGGGAATGGGAATGCCATTGGTGAGTGGGGATATCTGCGCAATTCAAACAGTTTTGGAAGTGGAGAGCATCGCCACAAGGATAGGACAAGTGAGGAGCAGAAGAAGGTAATGAAGAATGTAGTAGATGGACATTTTAGGGCATTGGTGGCTCAGCTGTTACAGGTCGAAAACCTACCTGTTGAAGACAATGGTGAAAACGTTTGGATGGAAATAATCACATCTCTCTCGTGGGAAGCTGCTACTTTATTGAAGCCAGATACTAGCAAAAGTGGAGGGATGGACCCAGCTGGTAATGTGAAAGTCAAATGCATTGCATGTGGCAGCCGCATTGAAAGTACGGTTGTTAAAGGAGTTGTTTGTAAGAAGAATGTGGCTCATCGTCGCATGACATCAAAAGTTGATAAACCTCGCTTGTTGATCCTTGGAGGGGCTCTTGAGTACCAGCGTGTTGCCAATCTGTTGTCTAGTGTAGATACCTTATTACAGCAGGAAATGGACCATCTGAAGATGGCAGTGGCAAAGATAGCCTCTCATCAACCAAATATCCTTTTGGTAGAGAAATCAGTCTCGAGATATGCACAGGAATATCTTCTTGCAAAAGACATATCTCTGGTACTTAATGTCAAGAGGCCACTTCTGGAGCGCATAGCACGTTGCACAGGCACTCAAATTGTGCCTTCAATTGATCATCTTTCATCACCAAAGTTGGGTTACTGTGAAGCTTTTCATGTTGAAAAGTTTGTTGAAAATCTTAGTAGTGCTGCTGCTCAAGGTGGTAAAAAACCAATGAAAACATTGATGTTTTTTGACGGCTGCCCAAAGCCATTGGGTTGCACAATTTTACTTAAAGGTGCTGATGAGGAAGAATTGAAGAAGGTAAAGCATGTGGTTCAGTATGCAGTTTTTGCAGCTTACCATCTGGCTTTGGAGACATCTTTTCTTGCTGATGAAGGAGTCTTCTTCCCAGAAATTCCGCTTAACAGTCTGCCTCTTCCTAATACAACATCAACCATTCAGAGGTCAATCTCAACAGTTCCTGATTTCGTTGCTCCTAGCAGTGAAAAGTCTCAGGGGCTTGAATCCGACACCGGACCACGGAGAACTAAGAGTGTCAGCAGTACTGAATCCTATTTGCCTAATGATGATCCTTGTGAATCTTTGCAATCTGCATCATGTATCAGCCATACAACTGCCTTTTATTCTTCCATTGTCGCTTCTGGAAATGCAATTCCAGGTTCATACAATGAGAAAATTCTTCCTAGTAAATACACAAATGACTCCACACAACCCCTGGAGGAGGAAACTCCTGAAGTGAACAACTCTTTGGGAATCATGAATGATCCTACTGTAAACGGTTATGGACCTGCAGAGAAATTAGATCATGGTATTTTAGCTGGCACTATGCAAAATGATCTCAAGCAAATCTCTACAAACCGATCAACTGTGTTAGAGTTATCTTCAGAAGATGTTCAACCTGAGAAGGCTGGAATCACAAATGAAGAGAAGGTTCCTGAGGAAGAAGCGTTTCCTCCATCACCCTCTGACCATCAAAGCATTTTGGTGTCTTTGTCATCTCGGTGCGTGTGGAAGGGAACTATGTGTGAGAGATCCCAGCTCTTTCGAATCAAATATTATGGCAGCTTTGATAAACCACTGGGTCGGTTTCTTCGAACTCATCAACAGGGAACACTTACCATATCAGTCAAGAAACTACCAGAAATTCTCCTTCCTGGTGAAAGGGAGGGAAAGATTTGGATGTGGCATAGATGCTTGCGGTGTCCAAGAATCAATGGCTTTCCTTCTGCTACACAGAGAATAGTAATGTCTGATGCTGCATGGGGTTTATCATTTGGGAAATTTTTGGAGCTCAGTTTCTCAAACCATGCTGCAGCCAGCAGGGTTGCAAGCTGTGGTCATTCTTTACACAGAGATTGTCTACGTTTTTATGGATTTGGGAATATGGTCGCTTGCTTTCGATATGCATCAATTGATGTTCACTCAGTCTACCTTCCCCCACACAAACTTGATTTTGATTATGGGAGTCAGGATTGGATACAAAAGGAATCAGATGAGATGGTTAAACGGGCAGAGGTTTTATTCTCCGAGGTACTCAATGGTCTTAGCAAAATAGGCGAGAAGAGATCAAGGGCTGAACTGGAGGGAATGTTGCAAAGGGAAAAACTGGAATTTGAGGAAATGCTTCATAAGGTTTTGAACCAGGAAAAGAGAAAGGGCCAACCTGAGATTGACATTCTGGAAATTTATCGGTTGCGGAGGCAGTTACTTTTCCAGTCATATATGTGGGATAGCCGCCTAATCACTGGGGTCAACTTATTCAAGTCTAGCGATGAAACTGATTTAAGCAGTACAAGTTCAGAGGATAAGGAAATACATGTTGATGAAAATCAGATAAGCGTGACCACTACAGCAGGAAGCCGCTTCAAAAGTGTTGACTCTATTGATGGTGATCCAAAAGAGCTGAAAAGAAGCCCAAGTGTTGGAGGAGTAGGAGGGGGTTATGTAAAAGATTCCCAATCTGTTGCATTTCATCGAGATATCGACATGCCCAAAAATACCAATCATAAGAAAGAAGACCAACCTAATCTTCCAATCAGCAAAAGCATATATGATCCATCTGAGCCCTTAGAACCTGAATTGCGTGTTCGCAGAGCAATGTCTGAAGGACCAATGTCTCTCATGTCTAGTTTGTCTGATACACTTGATGCAAAATGGACAGGTGGAGACCACTCTTCGGCACAGCCTGATTCATTTCTGGCAGAAGCTACCACAACTTCGATGCTGAAAGAAGCATCCACTGTTGGGGATCATGCCGAAGACCAGAATGCCAACAAGAGTATCTTTTCTTCTAAGGGTCAAGATAACATGGAAGACTCTTCAAGTTGGTTAGCAATGCCCTTCTTAAACTTCTATCGCCAGTTTAACAAGAATCTTTTTTCTAGTACAACAAAGTTTGATACACTAGTCGACAGCAATCCGGTTTATGTATCATCCTTCTGGAATCTGGAACTCCTAGGTGGTGCAAGGATGCTTCTGCCTATTGGTGTTAATGACACTGTCATTCCAATATATGATGATGAACCCTCAAGTGTTATAGCTTATGCCTTGACGTCACCAGAATACCATTCCCAATTGAATGATGATGTAGAGCGACCGAAAGATGCGAGTGATTTAGGTTCATCATATTTTTCTGAATCAACCACCTTACAGTCATACTCTTCTACTGATGAAATAGCTTTTGATCTTCAGAAGAGTTTCGGGTCAGTAGAGGAGATGTTATTGTCAATGCCATCTCGTAACTCATTGATGCTAGACCCAACATTATATTCAAAGACGATGCATGCCAAAGTTTCTTTCGGAGAAGATGGTCCCCTCGGCAAAGTAAGATATTTGGTGACTTGTTATTATGCCAAGCGATTTGAAGCCTTAAGAAGGGTCTGCTGTCCTTCAGAGTTTGATTATATAAGATCTTTGAGTCGCTGTAAGAAATGGAAAGCTCAAGGTGGGAAGAGCAATGTATTCTTTGCAAAAACATTGGATGATCGATTCGTCATTAAACAAGTAACAAAAACTGAGCTTGAATCATTCATTAAATTCGGGCCTGGATACTTCAAATATCTTTCAGAATCCATTGGCTCAGGAAGTCCCACATGCCTCGCAAAGATTCTTGGCATATACCAGATTACATCAAAGCATCTCAAAGGAGGGAAAGAATCAAAGATGGATGTTTTGGTTATGGAGAATCTTCTGTTTAGGAGAACTGTGACGCGACTTTATGATCTCAAAGGATCTTCCAGGTCCCGGTACAATCCAGATCCTAACGGGAGGAACAAAGTTCTGCTAGACCAGAACTTGATTGAAGCAATGCCGACTTCTCCTATTTTCGTGGGAAACAAGGCAAAACGGTTGTTAGAGCGAGCCGTCTGGAATGATACCGGCTTTCTTGCATCGGTTGATGTAATGGACTATTCGCTACTCGTCGGGGTGGATGAAGAGAAGCATGAGTTAGTTCTTGGGATCATTGATTTCATGAGACAGTATACATGGGACAAGCATCTTGAAACATGGGTAAAGGCTTCCGGCATCCTCGGAGGGCCAAAGAATGCATCTCCGACGATTATATCGCCAAAGCAGTACAAGAAAAGGTTCCGGAAAGCGATGACCACTTACTTTCTCATGCTTCCTGATCAGTGGTCACCTCCAGCCATAGTTGGAAGTTCATCACAGTCTGATTTAGGTGAAGATTACACTCAAGGTAGGTCCTCAGTTGAATGA 5319 0.4241 MDVVDKTFSDIVNVIKSWIPRRSEPANVSRDFWMPDQSCRVCYDCDSQFTLFNRRHHCRLCGRIFCNKCTANSIPAPVTSQINPWDEWEKIRVCNFCYKQWEQGVVAFNNNTQVSNLDCSATLSTLSSVSSKTSVTADSTNITLFSMPYSAGPYQQMQQGPCLNLHQSPMSGNNTDREVLSPPLGGRNDLAGDIGDPLQKQFEFPMNRSDDEDEYGVYQLDSEMRHYPQVNIYYGQAEFEGISNTDGSQKVHPDADNGNANLTSENGFDTQGLERNTAVGKSEDEPYIYENEAPSSLYVSEDVDAEPVDFENNGLLWLPPEPEDAEDERETFFVDEDDEDNDGNGNAIGEWGYLRNSNSFGSGEHRHKDRTSEEQKKVMKNVVDGHFRALVAQLLQVENLPVEDNGENVWMEIITSLSWEAATLLKPDTSKSGGMDPAGNVKVKCIACGSRIESTVVKGVVCKKNVAHRRMTSKVDKPRLLILGGALEYQRVANLLSSVDTLLQQEMDHLKMAVAKIASHQPNILLVEKSVSRYAQEYLLAKDISLVLNVKRPLLERIARCTGTQIVPSIDHLSSPKLGYCEAFHVEKFVENLSSAAAQGGKKPMKTLMFFDGCPKPLGCTILLKGADEEELKKVKHVVQYAVFAAYHLALETSFLADEGVFFPEIPLNSLPLPNTTSTIQRSISTVPDFVAPSSEKSQGLESDTGPRRTKSVSSTESYLPNDDPCESLQSASCISHTTAFYSSIVASGNAIPGSYNEKILPSKYTNDSTQPLEEETPEVNNSLGIMNDPTVNGYGPAEKLDHGILAGTMQNDLKQISTNRSTVLELSSEDVQPEKAGITNEEKVPEEEAFPPSPSDHQSILVSLSSRCVWKGTMCERSQLFRIKYYGSFDKPLGRFLRXTHQQGTLTISVKKLPEILLPGEREGKIWMWHRCLRCPRINGFPSATQRIVMSDAAWGLSFGKFLELSFSNHAAASRVASCGHSLHRDCLRFYGFGNMVACFRYASIDVHSVYLPPHKLDFDYGSQDWIQKESDEMVKRAEVLFSEVLNGLSKIGEKRSRAELEGMLQREKLEFEEMLHKVLNQEKRKGQPEIDILEIYRLRRQLLFQSYMWDSRLITGVNLFKSSDETDLSSTSSEDKEIHVDENQISVTTTAGSRFKSVDSIDGDPKELKRSPSVGGVGGGYVKDSQSVAFHRDIDMPKNTNHKKEDQPNLPISKSIYDPSEPLEPELRVRRAMSEGPMSLMSSLSDTLDAKWTGGDHSSAQPDSFLAEATTTSMLKEASTVGDHAEDQNANKSIFSSKGQDNMEDSSSWLAMPFLNFYRQFNKNLFSSTTKFDTLVDSNPVYVSSFWNLELLGGARMLLPIGVNDTVIPIYDDEPSSVIAYALTSPEYHSQLNDDVERPKDASDLGSSYFSESTTLQSYSSTDEIAFDLQKSFGSVEEMLLSMPSRNSLMLDPTLYSKTMHAKVSFGEDGPLGKVRYLVTCYYAKRFEALRRVCCPSEFDYIRSLSRCKKWKAQGGKSNVFFAKTLDDRFVIKQVTKTELESFIKFGPGYFKYLSESIGSGSPTCLAKILGIYQITSKHLKGGKESKMDVLVMENLLFRRTVTRLYDLKGSSRSRYNPDPNGRNKVLLDQNLIEAMPTSPIFVGNKAKRLLERAVWNDTGFLASVDVMDYSLLVGVDEEKHELVLGIIDFMRQYTWDKHLETWVKASGILGGPKNASPTIISPKQYKKRFRKAMTTYFLMLPDQWSPPAIVGSSSQSDLGEDYTQGRSSVE 1773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g00617 1773 Pfam TCP-1/cpn60 chaperonin family 408 649 IPR002423 GO:0005524
Arst2g00617 1773 SUPERFAMILY SAICAR synthase-like 1471 1740 - -
Arst2g00617 1773 Pfam FYVE zinc finger 33 101 IPR000306 GO:0046872
Arst2g00617 1773 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 1425 1597 IPR027484 -
Arst2g00617 1773 Coils Coil 1059 1079 - -
Arst2g00617 1773 MobiDBLite consensus disorder prediction 158 197 - -
Arst2g00617 1773 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 36 102 IPR017455 -
Arst2g00617 1773 MobiDBLite consensus disorder prediction 244 270 - -
Arst2g00617 1773 FunFam 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B 24 109 - -
Arst2g00617 1773 FunFam 1-phosphatidylinositol 3-phosphate 5-kinase FAB1 1599 1741 - -
Arst2g00617 1773 MobiDBLite consensus disorder prediction 1159 1184 - -
Arst2g00617 1773 MobiDBLite consensus disorder prediction 1198 1225 - -
Arst2g00617 1773 SUPERFAMILY GroEL apical domain-like 453 626 IPR027409 -
Arst2g00617 1773 FunFam 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B 1442 1597 - -
Arst2g00617 1773 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 1515 1682 IPR002498 GO:0016307|GO:0046488
Arst2g00617 1773 Gene3D - 1599 1741 - -
Arst2g00617 1773 CDD PIPKc_PIKfyve 1477 1740 IPR044769 GO:0000285
Arst2g00617 1773 SMART fyve_4 28 103 IPR000306 GO:0046872
Arst2g00617 1773 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 23 113 IPR013083 -
Arst2g00617 1773 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 1419 1740 IPR002498 GO:0016307|GO:0046488
Arst2g00617 1773 MobiDBLite consensus disorder prediction 1278 1301 - -
Arst2g00617 1773 SUPERFAMILY FYVE/PHD zinc finger 31 103 IPR011011 -
Arst2g00617 1773 PANTHER 1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE-RELATED 22 1751 - -
Arst2g00617 1773 MobiDBLite consensus disorder prediction 1254 1273 - -
Arst2g00617 1773 PANTHER 1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE-RELATED 22 1751 - -
Arst2g00617 1773 MobiDBLite consensus disorder prediction 158 178 - -
Arst2g00617 1773 SMART PIPK_2 1454 1741 IPR002498 GO:0016307|GO:0046488
Arst2g00617 1773 CDD FYVE_PIKfyve_Fab1 32 99 - -
Arst2g00617 1773 CDD Fab1_TCP 388 660 - -
Arst2g00617 1773 Gene3D GroEL 452 626 IPR027409 -
Arst2g00617 1773 MobiDBLite consensus disorder prediction 691 724 - -
Arst2g00617 1773 MobiDBLite consensus disorder prediction 1753 1773 - -
Arst2g00617 1773 MobiDBLite consensus disorder prediction 335 374 - -
Arst2g00617 1773 FunFam 1-phosphatidylinositol 3-phosphate 5-kinase isoform X1 452 626 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g00617 Arst-Chr2 6249339 6258056 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g00617 2 1773 EF-hand Containing Proteins AT3G14270 56.901 0.0 1913
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g00617 K00921 - gmx:100819364 2563.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst2g00617 2 6249339 6258056 Arst2g00617 2 6249339 6258056 ECH