Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g00600 ATGGCAGAAAAGTCATGTATCAAGCGCCTTCAGAAGGAATACAGAGCTCTTTGTAAAGAGCCAGTGTCCCATGTTGTAGCTCGCCCATCACCAAATGATATTCTTGAATGGCATTATGTGTTGGAGGGAAGCGAAGGAACACCTTTTGCAGGTGGATATTACTACGGAAAAATCAAGTTTCCTCCAGAATATCCATATAAGCCTCCTGGAATCAGCATGACTACACCTAATGGACGGTTCATGACGCAGAAAAAGATTTGTTTGTCTATGAGTGATTTTCATCCTGAAAGTTGGAATCCTATGTGGTCTGTTTCAAGCATACTCACAGGGCTTCTTTCATTCATGATGGACAACAGCCCAACCACCGGCAGTGTAAACACCACCACCGCCGAGAAGCAGCGTTTAGCAAAATCTTCCCTTTCTTTCAATTGCAAGAACGCAACATTCAGGAAAATGTTCCCTGAGTATGTGGAGAAGTACAACCAGGAGCAGCAGCTTTCTGAACAAGTTCCTCCCGAGCAGGCATCATCAGAGGCAGCGCCTAATGACACAAGTCCAAAGGCTCTTTTGGAGAAGAATTTGGATTCTACGGAAGAAGGAACGAAAAGAGTAGAACAGTTGAAGGTTGTAAAGAAAAACGGAAAGCAACCATTCCCAGCATGGATGATGTTATTACTATTCTCCATCTTTGGGGTTGTAATGGCATTACCATTGCTTCAGCTCTGA 726 0.438 MAEKSCIKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGYYYGKIKFPPEYPYKPPGISMTTPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSPTTGSVNTTTAEKQRLAKSSLSFNCKNATFRKMFPEYVEKYNQEQQLSEQVPPEQASSEAAPNDTSPKALLEKNLDSTEEGTKRVEQLKVVKKNGKQPFPAWMMLLLFSIFGVVMALPLLQL 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g00600 241 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 5 162 IPR000608 -
Arst2g00600 241 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 7 159 - -
Arst2g00600 241 MobiDBLite consensus disorder prediction 163 201 - -
Arst2g00600 241 SMART ubc_7 8 162 - -
Arst2g00600 241 FunFam Ubiquitin-conjugating enzyme E2 34 1 178 - -
Arst2g00600 241 SUPERFAMILY UBC-like 5 157 IPR016135 -
Arst2g00600 241 MobiDBLite consensus disorder prediction 163 183 - -
Arst2g00600 241 Gene3D Ubiquitin Conjugating Enzyme 1 178 IPR016135 -
Arst2g00600 241 CDD UBCc 7 157 IPR000608 -
Arst2g00600 241 Pfam Ubiquitin-conjugating enzyme 9 132 IPR000608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g00600 Arst-Chr2 6015215 6019459 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g00600 1 241 Miscellaneous Gene Families AT1G17280 78.423 1.62e-137 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g00600 K04554 - gmx:100778181 426.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst2g00600 2 6015215 6019459 Arst2g00600 2 6015215 6019459 ECH