Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g00553 ATGGTAGTAGCTGCAGGTTCTAGTGTTGCTAAGCTCAACTTGAGAAAAGGGAAGGGTTCTTCTTATAATGTTATGAGCGGTGGTGATAACAGTGATGGAGATCTTTCCATTGTTAGTAATAACAGTGACAGTGAGTGTTGTTCATCATCAATGGTGGAGGTGGAAAGGGGTCCTTCATGTGTTTCATTCACCACTTTCAATATCTTGGCTCCTATTTACAAAAGGATTGATCCAAAGAACCAAAGCCTCAGGGAAAGTGAGTTCAGGTACTCCTGGTTGTCCAGGAATGAATGTATTCTGAATTCCTTGCTTGCTGAATCATCTTCCATAATGTGCCTTCAGGAATTTTGGGTTGGAAATGAAGAACTTGTTCATATGTATGAGGAGAAACTAGGGGATGCTGGTTACCATCTCTTCAAGCTTGCTCGAACCAACAACCGCGGAGATGGTCTTCTTACTGCTATACACAAAAAATATTTACATGTTGTGAATTATCGGGAGTTGTTTTTAAACGATTTCGGTGATCGTGTTGCTCAGTTGTTACACGTTCAGTCTATTGCCCCTGTTTCGCAAAACCAAATGGGAAGTCTTCACCAAGAGTTTCTTATTGTGAACACACACCTGTTATTTCCTCACAATTCAAGTCTATGTATAGTGAGATTGCATCAGGTTCACCAAATTTTGGAGCAAGTGGAATTGTTTCAAAAAGAAAACAAGCTGAAACCGATGCCTATTATACTCTGCGGTGACTGGAATGGAAGTAAGAAAGGGCATGTATACAAGTTTCTTAGGTCACAAGGGTTTGTTTCATCATATGACAGTTATGCAGATTCCCACAAGCAGTGGGTTAGTCACCGAAATCATAGAGGAAATATCTGCGGTGTCGACTTCATTTGGCTTTGCAATCCGAACCAACCACGGAAACCTTTGAAGACAAGTTGGGCCGAAGCTGTTTTTAGCATACTCAAGTACCAGCTACGAAAAGCTTCGCTGTCTGAAGACGGTGCATTTACATTTCTGAAGGGCGACAATTGTGCCGATGCTGTGACATATCTTAGTTTCCATGAAGCATTGCGGCAGGTAAAATTAGTTGATGTGCCTAATGGATTATGCATTCAGCAGTTCCAAGATCTATGGAATCAAGCAGATGTTGATGGAAATGGGGTCATCGACTTCGAGGAATTCAAGCAAAAGATTTGGAACTCTACATGTCCAGAGCCTGTATTGGAAAGCTTCAATGGTTGCATGGAGGATGTGAATGCGACGAATGAGCACGAAACCATCGGCTTTAAGGTGAAGAAGGCGATGTTGTTCCCTCGAGAAGTCGAGAGAGGACATTGGCCAGAAGAGTATTCTCTTTCAGATCATGCTAGGCTCACTGCTGTGTTTTCACCAGCAAAGATGAGATGTCATGGATCACAAAACTATAGCTAG 1434 0.4212 MVVAAGSSVAKLNLRKGKGSSYNVMSGGDNSDGDLSIVSNNSDSECCSSSMVEVERGPSCVSFTTFNILAPIYKRIDPKNQSLRESEFRYSWLSRNECILNSLLAESSSIMCLQEFWVGNEELVHMYEEKLGDAGYHLFKLARTNNRGDGLLTAIHKKYLHVVNYRELFLNDFGDRVAQLLHVQSIAPVSQNQMGSLHQEFLIVNTHLLFPHNSSLCIVRLHQVHQILEQVELFQKENKLKPMPIILCGDWNGSKKGHVYKFLRSQGFVSSYDSYADSHKQWVSHRNHRGNICGVDFIWLCNPNQPRKPLKTSWAEAVFSILKYQLRKASLSEDGAFTFLKGDNCADAVTYLSFHEALRQVKLVDVPNGLCIQQFQDLWNQADVDGNGVIDFEEFKQKIWNSTCPEPVLESFNGCMEDVNATNEHETIGFKVKKAMLFPREVERGHWPEEYSLSDHARLTAVFSPAKMRCHGSQNYS 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g00553 477 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 35 463 - -
Arst2g00553 477 SUPERFAMILY EF-hand 351 401 IPR011992 -
Arst2g00553 477 ProSiteProfiles EF-hand calcium-binding domain profile. 370 405 IPR002048 GO:0005509
Arst2g00553 477 Gene3D Endonuclease/exonuclease/phosphatase 41 471 IPR036691 -
Arst2g00553 477 FunFam Putative calcium-binding protein 44 467 - -
Arst2g00553 477 SUPERFAMILY DNase I-like 44 275 IPR036691 -
Arst2g00553 477 ProSitePatterns EF-hand calcium-binding domain. 383 395 IPR018247 -
Arst2g00553 477 Gene3D - 306 430 - -
Arst2g00553 477 Pfam Endonuclease/Exonuclease/phosphatase family 105 269 IPR005135 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g00553 Arst-Chr2 5672084 5676532 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g00553 126 470 EF-hand Containing Proteins AT1G02270 62.464 1.25e-157 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g00553 - - gmx:100777138 741.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst2g00553 2 5672084 5676532 Arst2g00553 2 5672084 5676532 ECH