Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g00500 ATGTCTTTGTCTGCAACCAAGTTCGTGCACCCCATCACAACTCCTCCCTCTACCAGATCCAGTGACAAGCCTCTCTTTTCCACTTTCTTTGGATCCAATCATACCAAGCTTCGCTTCAATAAACCTATTGTAGCTGCTCAACGCCGTTCTTCATCGGCAGCATCTACGTCTTCGCCTGTTGTTGCTGTCTCCGATGTTGTCAAGGAGAAGAAGCTCAAATCAACCTCCAATCTGCTAATTACTAAAGAGGAAGGCTTGGTGCTCTATGAAGACATGATATTAGGTAGGTTCTTTGAAGATATGTGTGCCCAGATGTATTATAGGGGCAAGATGTTTGGTTTTGTTCACTTGTACAATGGCCAAGAAGCTGTGTCAACTGGATTCATCAAGTTTCTTAAGAAGGAAGATTATGTGGTGAGTACGTACAGGGACCATGTTCATGCCCTTAGTAAGGGGGTCCCGGCTCGTGAAGTGATGAGTGAACTCTTTGGGAAGGCAACGGGTTGCTGCCGAGGTCAGGGCGGTTCGATGCATATGTTCTCAAAACAGTACAATTTGCTCGGTGGGTTTGCGTTCATTGGTGAAGGAATTCCAGTGGCCACTGGGGCAGCCTTCTCCAGTAAGTACAGAAGGGAGGTGTTGAAAGAACCAGGTGCTGATGAGGTGACATTGGCATTTTTCGGAGATGGGACTTGTAACAATGGACAGTTCTATGAATGCCTTAACATGGCAGCTTTATGGAAATTGCCAATTGTGTTTGTGGTGGAAAACAATTTGTGGGCTATTGGTATGTCACACCTCAGGGCAACTTCTGATCCGCAGATATGGAAGAAGGGACCGGCATTTGGAATGCCCGGGATCCATGTCGATGGGATGGATGTCTTGAAGGTCAGAGAGGTCGCAAAGGAGGCAATTGAAAGAGCTAGAAGAGGAGAGGGACCTACTTTAGTGGAATGTGAGACTTATAGATTTAGAGGACATTCGTTGGCTGATCCTGATGAGCTTCGTGACCCTGCTGAGAAGGCACACTATGCAGGCAGGGATCCCATCACAGCACTGAAGAAATATCTTTTTGATAACAAGTTAGCCTCTGAACAAGAATTGAAGGCCATAGACAAGAAAATCGAGGAGCTACTTGACGATGCAGTCGAGTTTGCTGATGAGAGCCCTCTCCCTCCCCGCAGCCAGCTTCTGGAGAACGTATTTGCCGATCCAAAAGGTTTTGGAATTGGACCGGATGGAAAGTATAGATGCGAGGATCCAAAATTCACCCAAGGCACTGCTCATGTCTAA 1293 0.4679 MSLSATKFVHPITTPPSTRSSDKPLFSTFFGSNHTKLRFNKPIVAAQRRSSSAASTSSPVVAVSDVVKEKKLKSTSNLLITKEEGLVLYEDMILGRFFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKFLKKEDYVVSTYRDHVHALSKGVPAREVMSELFGKATGCCRGQGGSMHMFSKQYNLLGGFAFIGEGIPVATGAAFSSKYRREVLKEPGADEVTLAFFGDGTCNNGQFYECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIWKKGPAFGMPGIHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADPDELRDPAEKAHYAGRDPITALKKYLFDNKLASEQELKAIDKKIEELLDDAVEFADESPLPPRSQLLENVFADPKGFGIGPDGKYRCEDPKFTQGTAHV 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g00500 430 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR 61 413 - -
Arst2g00500 430 MobiDBLite consensus disorder prediction 1 20 - -
Arst2g00500 430 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 76 405 IPR029061 -
Arst2g00500 430 Gene3D - 40 412 - -
Arst2g00500 430 Coils Coil 361 388 - -
Arst2g00500 430 Pfam Dehydrogenase E1 component 93 392 IPR001017 GO:0016624
Arst2g00500 430 FunFam Pyruvate dehydrogenase E1 component subunit alpha 46 411 - -
Arst2g00500 430 CDD TPP_E1_PDC_ADC_BCADC 88 386 - -
Arst2g00500 430 NCBIfam pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha 83 403 IPR017597 GO:0004739|GO:0006086|GO:0043231
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g00500 Arst-Chr2 5096765 5099541 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g00500 27 430 Acyl Lipid Metabolism Gene Families AT1G01090 80.446 0.0 681
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g00500 K00161 - zju:107423789 712.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst2g00500 2 5096765 5099541 Arst2g00500 2 5096765 5099541 ECH