Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g00408 GGTGAATCTGCAGTCACAAAGATCGTTACTCTGGCCGAGGAAGCTAAGCTCGCTAGTCGTGAAGGCGTCGTCACCGCCGCCGCCGCTCCTTCCTACGCCTTCACCACCATCTGCAAGTCCCTTATCGCCGGTGGAGTCGCCGGAGGAGTATCACGAACAGCAGTTGCCCCACTAGAACGGTTGAAGATTTTGCTACAGGTCCAGAATCCTCATAACATTAAATACAATGGAACAGTCCAAGGCCTGAAATATATATGGAGAACTGAAGGTTTTCGTGGACTGTTCAAAGGGAATGGTACTAATTGTGCTCGGATTGTCCCTAACTCTGCAGTGAAGTTCTTCAGTTATGAGCAAGCTTCTAAGGGTATACTGTATATGTATAGGCAGCAAACTGGAAATGAGGATGCTCAGCTGACTCCTGTTTTACGACTTGGAGCTGGAGCATGTGCTGGAATAATTGCCATGTCTGCAACTTATCCAATGGATATGGTTCGAGGCAGGATAACTGTACAGACTGAGAAATCCCCTTATCAGTATAGAGGAATGTTCCATGCTCTGTCTACCGTACTTAGGGAAGAAGGTCCACGTGCTTTATACAAGGGTTGGCTACCTTCAGTAATTGGAGTTATTCCTTATGTGGGTCTCAACTTTGCTGTCTACGAGTCTTTAAAAGATTGGTTAATCAAATCCAAACCGTTTGGTCTAGCTCAAGATTCTGAGTTGAGTGTGACAACACGTCTGGCTTGTGGTGCTGTTGCTGGAACTTTTGGACAAACTGTTGCTTATCCTCTCGACGTCATTCGTCGAAGAATGCAGATGGTGGGCTGGAACCATGCTGCTTCTGTTGTAGCTGGGGATGGAAGAGGCAAGGTCCTGCTCGAATACACTGGAATGATAGATGCATTTAGGAAAACTGTTCGGTACGAGGGATTTGGTGCATTATACAAGGGTCTGGTGCCAAATTCTGTAAAGGTGGTGCCGTCCATAGCAATCGCATTTGTAACGTACGAGGTGGTGAAGGACATTCTAGGAGTCGAGTTCCGAATATCAGACTGA 1056 0.4678 MASEDVKSGESAVTKIVTLAEEAKLASREGVVTAAAAPSYAFTTICKSLIAGGVAGGVSRTAVAPLERLKILLQVQNPHNIKYNGTVQGLKYIWRTEGFRGLFKGNGTNCARIVPNSAVKFFSYEQASKGILYMYRQQTGNEDAQLTPVLRLGAGACAGIIAMSATYPMDMVRGRITVQTEKSPYQYRGMFHALSTVLREEGPRALYKGWLPSVIGVIPYVGLNFAVYESLKDWLIKSKPFGLAQDSELSVTTRLACGAVAGTFGQTVAYPLDVIRRRMQMVGWNHAASVVAGDGRGKVLLEYTGMIDAFRKTVRYEGFGALYKGLVPNSVKVVPSIAIAFVTYEVVKDILGVEFRISD 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g00408 359 PANTHER SOLUTE CARRIER FAMILY 25 44 353 - -
Arst2g00408 359 Pfam Mitochondrial carrier protein 146 238 IPR018108 -
Arst2g00408 359 Pfam Mitochondrial carrier protein 45 130 IPR018108 -
Arst2g00408 359 Pfam Mitochondrial carrier protein 248 351 IPR018108 -
Arst2g00408 359 Gene3D Mitochondrial carrier domain 41 353 IPR023395 -
Arst2g00408 359 PRINTS Mitochondrial carrier protein signature 61 75 IPR002067 GO:0055085
Arst2g00408 359 PRINTS Mitochondrial carrier protein signature 48 61 IPR002067 GO:0055085
Arst2g00408 359 PRINTS Mitochondrial carrier protein signature 161 179 IPR002067 GO:0055085
Arst2g00408 359 PRINTS Mitochondrial carrier protein signature 258 280 IPR002067 GO:0055085
Arst2g00408 359 PRINTS Mitochondrial carrier protein signature 105 125 IPR002067 GO:0055085
Arst2g00408 359 PRINTS Mitochondrial carrier protein signature 207 225 IPR002067 GO:0055085
Arst2g00408 359 FunFam Mitochondrial substrate carrier 41 353 - -
Arst2g00408 359 SUPERFAMILY Mitochondrial carrier 45 346 IPR023395 -
Arst2g00408 359 ProSiteProfiles Solute carrier (Solcar) repeat profile. 249 350 IPR018108 -
Arst2g00408 359 ProSiteProfiles Solute carrier (Solcar) repeat profile. 43 130 IPR018108 -
Arst2g00408 359 ProSiteProfiles Solute carrier (Solcar) repeat profile. 146 234 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g00408 Arst-Chr2 3688637 3692473 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g00408 49 354 EF-hand Containing Proteins AT5G51050 39.739 1.19e-67 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g00408 K14684 - gmx:100814032 642.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst2g00408 2 3688637 3692473 Arst2g00408 2 3688637 3692473 ECH
Arst6g00308 6 2777088 2781014 Arst2g00408 2 3688637 3692473 PCT