Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g00197 ATGGAGTTGCAGGTAGGGCAAGGAGAACAACAACAGCAGCAAAGAGAGGAGCTTCTTCGTGTTGAAGTTTCCGGACTGGAAGAAGAAGATGAAGAAATGGATGATGGTGATGATGATGCTGAAGAAGGTTCCTCTCGTCTTCCTGAGGGTTACTACGAAGTCGAAGCCATTCGTAAAAGGAGGGTCCGCAAGGGTGAGGTTCACTACTTGGTCAAATGGCTTGATTGGCCTGAGACTGCCAACACATGGGAGCCTCTGGAAAATCTGGAGGGTGTTTCTGAAATCGTCTCGGCTTTCGAGGAAAGCTGGCATTCAGCGCCGCAACGCAGGCGTAAGCGAAAGAATGTTGTTCAACATTCTGCGCTTAAGAAGAGGCTGGAGCGATCCGAGACTCCGTACAGCCTCAGACGATTTCCAGCTTCAACATCCACTAGCAACCATGCTCCATCAGCTCCTCCTCCTCAAATAACGGGCCTAAATTATGGTGACATCCCTGCCTTTCCACAGCCAGTGCTTTTCGCTGACGAAGTGGAAAACAACGGGGATGCTAGCATTGTCAGAAATGCTGCACCCCCAAATGTGAGTAGGCTTGGAAATGCTTCCGGGTCAGTCGGTGCTGCAAATGAAGAGCCCGATTATGATCCGAAGCTTAGCGAGCTTAGAGCATCAACAGCTAATGGCTCTGATGCTGACAGGCTCGCCATACAGTTCCAAGATCCTAATCCCTCGTTAGGGGATGGTCATGGAGAGGGGCAACCAAATGGTGGTTGCATGGAATCAAGCCAGGGTGGCGGCAGCAAAGGAGCCAGAAAGAGAAAATCTGGTTCTGTTAAGAGGTTTAACCGAGATTTACTCTCTGGTGAGCCTCTTAGTTTGCAGAATCCAGCTGGCACATCTGATGGCTCGGCTCAACAGGTGGTAGCCAGTAATAGGAAGGTGGATCTGCCCAGACCTTCCAACCCGATCGTAAAGATCCTAAAGCCAGTGAACTGTTTGCCGCCAATTCCAATCAGCACTCAGGATGTTGTGGTGAGCTTCTTGGCGATAAGGGCTGACGGCTCGGAGATATTGGTGGACAACCATTATCTCAAGAGGAATTATCCAATCATGACTGTGTTTACGGCCCTTTTACTAGAAGCTAATGGTTTTCTTGGGTTACAGCTGATCGATTTCTATGAGCAGCATCTCCGATACAGTCCTATGTCGTGA 1209 0.4955 MELQVGQGEQQQQQREELLRVEVSGLEEEDEEMDDGDDDAEEGSSRLPEGYYEVEAIRKRRVRKGEVHYLVKWLDWPETANTWEPLENLEGVSEIVSAFEESWHSAPQRRRKRKNVVQHSALKKRLERSETPYSLRRFPASTSTSNHAPSAPPPQITGLNYGDIPAFPQPVLFADEVENNGDASIVRNAAPPNVSRLGNASGSVGAANEEPDYDPKLSELRASTANGSDADRLAIQFQDPNPSLGDGHGEGQPNGGCMESSQGGGSKGARKRKSGSVKRFNRDLLSGEPLSLQNPAGTSDGSAQQVVASNRKVDLPRPSNPIVKILKPVNCLPPIPISTQDVVVSFLAIRADGSEILVDNHYLKRNYPIMTVFTALLLEANGFLGLQLIDFYEQHLRYSPMS 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g00197 402 ProSiteProfiles Chromo and chromo shadow domain profile. 52 111 IPR000953 -
Arst2g00197 402 MobiDBLite consensus disorder prediction 132 162 - -
Arst2g00197 402 Coils Coil 9 29 - -
Arst2g00197 402 Gene3D - 26 103 - -
Arst2g00197 402 MobiDBLite consensus disorder prediction 237 312 - -
Arst2g00197 402 PANTHER CHROMO DOMAIN-CONTAINING PROTEIN LHP1 21 400 IPR044251 GO:0006325|GO:0031507
Arst2g00197 402 MobiDBLite consensus disorder prediction 287 309 - -
Arst2g00197 402 Pfam Chromo (CHRromatin Organisation MOdifier) domain 52 101 IPR023780 -
Arst2g00197 402 CDD CD_CSD 52 101 - -
Arst2g00197 402 ProSitePatterns Chromo domain signature. 69 89 IPR023779 -
Arst2g00197 402 MobiDBLite consensus disorder prediction 23 42 - -
Arst2g00197 402 MobiDBLite consensus disorder prediction 135 153 - -
Arst2g00197 402 MobiDBLite consensus disorder prediction 185 214 - -
Arst2g00197 402 SMART chromo_7 51 104 IPR000953 -
Arst2g00197 402 MobiDBLite consensus disorder prediction 1 48 - -
Arst2g00197 402 MobiDBLite consensus disorder prediction 1 18 - -
Arst2g00197 402 SUPERFAMILY Chromo domain-like 46 110 IPR016197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g00197 Arst-Chr2 1631175 1634071 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g00197 - - adu:107472716 745.732