Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g00144 ATGGCTCTGATCACATCACAGCCTAAACACCCTCTTCTTAACCAAATTACCACTGTTCACTGTGCAATTCCAAGGTTGAACAGAACTGTGATTGGTCTTGGATCCTTCACAAACAATGTTAAAACCATTAAAGTTTGTAACTTTGACTCAAACCCAAGAAAATTCAGTCTTCAAAATCACAACTTTATTACCTATAAAAATAACAAGAAGCCAATAACAATAGCAGAACAAGAACAAGAGCAAGGGCCATTGAGGAATCAGAGAAGGATTCTGCTATCTGATGTGGTTGTGGAGAGAGAGAGGAATGTGTTATTTGGAAGGAAATGGAACTCACTGGATGTTGGAACTGCTGGTGTTGTTCTTGCCATGCATGTTCTTAGTCTCTTTGCACCATTTCAATTCAATTTCCATGCTCTTTGTGTTGCTTTGTCTTTGTATGTTGTAACTGGTCTATTTGGTATCACACTCTCTTTCCATAGAAACCTTTCTCATAGGAGCTTCAAGCTTCCCAAATGGCTTGAATATACATTTGCCTATTGTGGAGTTCTTGCTCTTCAGGGTAACCCAATTGATTGGGTTAGCACTCATAGGTACCATCACCAATTCTGTGATTCAGAGAGAGACCCTCATAGCCCCACTGAAGGATTCTGGTTCAGCCATATGAGTTGGCTATTTGATACAAATTCTATCATAGAAAGGTGTGGGGAGACAAACAATGTTGGTGATTTAGAGAAACAATCTTTTTATAGGTTTATAAGAAGTAGTTACATTGTTCATCCACTTGCTTTGGGAGCTCTTCTTTATGCCATTGGAGGATTTCCTTTTCTTGTTTGGGGAATGGGTGTGAGGATTGTTTGGGTGTACCACATAACTTGGTTGGTAAATTCAGCTTGCCATGTATGGGGGAATCAAGCATGGAACACCAAGGACTTATCCAGAAACAATTGGTGGGTGGCATTGCTTGCATTTGGTGAAGGTTGGCACAATAACCACCATGCATTTGAGTATTCAGCTAGACATGGCTTAGAGTGGTGGCAATTGGACATGACTTGGTATGTGGTTAGGTTCTTGCAAGCAATTGGATTGGCCACTCATGTCAAGCTACCCTCTCAAAGTCACAAGCAAAAATTGGCATTCAATGAATAA 1146 0.4031 MALITSQPKHPLLNQITTVHCAIPRLNRTVIGLGSFTNNVKTIKVCNFDSNPRKFSLQNHNFITYKNNKKPITIAEQEQEQGPLRNQRRILLSDVVVERERNVLFGRKWNSLDVGTAGVVLAMHVLSLFAPFQFNFHALCVALSLYVVTGLFGITLSFHRNLSHRSFKLPKWLEYTFAYCGVLALQGNPIDWVSTHRYHHQFCDSERDPHSPTEGFWFSHMSWLFDTNSIIERCGETNNVGDLEKQSFYRFIRSSYIVHPLALGALLYAIGGFPFLVWGMGVRIVWVYHITWLVNSACHVWGNQAWNTKDLSRNNWWVALLAFGEGWHNNHHAFEYSARHGLEWWQLDMTWYVVRFLQAIGLATHVKLPSQSHKQKLAFNE 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g00144 381 PRINTS Fatty acid desaturase family 1 signature 196 225 IPR015876 GO:0016717
Arst2g00144 381 PRINTS Fatty acid desaturase family 1 signature 159 179 IPR015876 GO:0016717
Arst2g00144 381 PRINTS Fatty acid desaturase family 1 signature 281 302 IPR015876 GO:0016717
Arst2g00144 381 PRINTS Fatty acid desaturase family 1 signature 324 338 IPR015876 GO:0016717
Arst2g00144 381 PANTHER ACYL-COA DESATURASE 68 376 IPR015876 GO:0016717
Arst2g00144 381 Pfam Fatty acid desaturase 143 355 IPR005804 GO:0006629
Arst2g00144 381 CDD Delta9-FADS-like 138 367 IPR015876 GO:0016717
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g00144 Arst-Chr2 1238005 1239924 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g00144 1 381 Lipid Metabolism Gene Families AT3G15850 64.508 7.99e-179 500
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g00144 K20416 - gmx:100527024 631.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst2g00144 2 1238005 1239924 Arst2g00144 2 1238005 1239924 ECH