Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g00139 ATGGAACAAGTCCTGAACAAGTTACAAGGTATCTATCTAAGGAAAATGCAAATAAAGATTATTACAGATCGAATTTTCGACACGGTAAAGAATGATAGAGGAAGAGCTAATTTGAAATTTGAAGATCTGTATATTGCTGTTTTACTTGTGTACAATGATATCAATAAGTTTTTGCCTGTTACACATATTGATCCTCCATCCAAAGCCAAAGTCAGAGAAATCATGAAGGAATGTGACATCAACTTTGATGGAGAAATCGATCGAAACGAATTTTATGACTTCATCAAGCAGATCACATCAGATACAGTCACGATCGTTAGTAAACGACTCATCCTCACCTTCGCCATAGCACCAACGGTCGCCATGCTAACAAAGAAAATCACAGAAGGGATCCCACATGTTGGGAATATGGTTAGATGGTTACCCAATTCAGTTTATGCTTCAACTGTGACACTTGCAGTTTGGTGGCACCAAAAACAAAAACTCAGTTGA 492 0.376 MEQVLNKLQGIYLRKMQIKIITDRIFDTVKNDRGRANLKFEDLYIAVLLVYNDINKFLPVTHIDPPSKAKVREIMKECDINFDGEIDRNEFYDFIKQITSDTVTIVSKRLILTFAIAPTVAMLTKKITEGIPHVGNMVRWLPNSVYASTVTLAVWWHQKQKLS 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g00139 163 ProSiteProfiles EF-hand calcium-binding domain profile. 66 101 IPR002048 GO:0005509
Arst2g00139 163 SMART efh_1 70 98 IPR002048 GO:0005509
Arst2g00139 163 PANTHER CALCIUM ION-BINDING PROTEIN 9 159 - -
Arst2g00139 163 SUPERFAMILY EF-hand 37 99 IPR011992 -
Arst2g00139 163 Gene3D - 14 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g00139 Arst-Chr2 1195707 1198341 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g00139 1 156 EF-hand Containing Proteins AT1G64850 60.897 4.78e-65 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g00139 - - ahf:112777082 296.589