Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g00138 ATGGGACAAATCCTCGACAAGCTTCAGGGTAAGGAGTGGAGGCGAAAGCAAATAAGGAAGATTACAGATCGAGTTTTTGATGGCGTGAAGAATGAGACGGGAAGGGCTAATTTGAAATTTGAAGATCTGTATATTGCTGTTTTGATTGTGTACAATGATATCAACAAGCATTTACCTGGTCCGCATTTTGATCCTCCACCAAAAGACAAAGTCAGAGAGATGATGAAGAATTGTGATATCAACCTTGATGGGGAAATCGACCGGGAAGAGTTTTACAATTTCATCAAGCAGTTGACTGCTGATACTTTCATCATTGTTAGTCAAAAGCTTATTATCACTTTGGCTGTAGCACCAGCTGTTGCATTGGCAACAAAGAGAAGCACTGAAAAGGTCCCTGGTGTTGGGAATGTGGTGCAGAAGATACCAAATTCGGTTTATGCTTCACTTGTGACCCTTGCAGTTGTGTGGTTCCAAAAACAGACCTTTGGAGATGATCCAAAGTACTAG 507 0.4142 MGQILDKLQGKEWRRKQIRKITDRVFDGVKNETGRANLKFEDLYIAVLIVYNDINKHLPGPHFDPPPKDKVREMMKNCDINLDGEIDREEFYNFIKQLTADTFIIVSQKLIITLAVAPAVALATKRSTEKVPGVGNVVQKIPNSVYASLVTLAVVWFQKQTFGDDPKY 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g00138 168 SUPERFAMILY EF-hand 59 99 IPR011992 -
Arst2g00138 168 ProSiteProfiles EF-hand calcium-binding domain profile. 66 101 IPR002048 GO:0005509
Arst2g00138 168 SMART efh_1 70 98 IPR002048 GO:0005509
Arst2g00138 168 PANTHER CALCIUM ION-BINDING PROTEIN 1 160 - -
Arst2g00138 168 Gene3D - 16 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g00138 Arst-Chr2 1191555 1195431 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g00138 1 156 EF-hand Containing Proteins AT1G64850 71.154 8.05e-83 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g00138 - - gmx:100526914 246.899