Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g00048 ATGGATGATAGTAAAGAATCATTAACTGATGCCAATGAAGCAGAAGCCACTACTTCAACACTCATTGCTGGTCTTCCAGATGACATATCTCTTTGCTGCTTGGCACGAATTCCTAGAAAACATCATTCAGTCCTGAAGTGTGTCTCAAAGAGATGGAGGGACTTGGTTTGCAGTGAAGAGTGGTATCAATATCGCCGAAAGCACAAACTTGATGAGACCTGGATCTATGCTTTGTGCAGGGGTGAATTAGAAGATCAGATTTGCTGCTATGTTTTGGATCCAAACTCATCAAGAAGATCTTGGAAGCTTATTCCGGGGCTTCCACCTCGCATGTTGAAGAGAAAAGGCATGGGATTTGAAGCTTTAGGAAATAAACTATTCTTATTTGGAGGTTGTGGGTGGTCTGAAGATGCTACTGATGAGGCCTATTCTTATGATGCTTCCACAAACACTTGGGTTGAAGCTGCTTCCTTGTCAACTGCTAGGTGCTACTTTGCTTCTGAAGTTTTAGGTGAGAAGTTATATGCCATTGGAGGAATAGGTTCAAATTCAAGTGATCCTCATTCTTGGGATACTTTTGACCCTTGCACAAATACTTGGATATCTCATAGAGATCCCAATATTGTTCCCGAAATAGAAGATTCTGTAGTGATGGATGGGAAGATATACATCCGGTGCGGCAAATCTCCAGTAACTCACCGCGTGTATGGCGTTGTATATGATCCGTCGAATGGCACATGGCAGCATGCTGATACTGAGCTGGTATCAGGATGGAGCGGTCCTGCAGTTGTTGTTGATGGAGTCCTTTATGTTTTGGATGAGAGTTCGGGAACGCGGTTAATGATGTGGCATAAGGAGAGGCAGGAATGGTTGCCCGTTGGAAGATTTTCGCCGCTGCTTACAAGGCCTCCATGCCGGGTTGTTGCAGTTGGTAAGACCATTTTCGTTGTTGGCAGAGGACTTAGCACTGTGGTTATTGATGTTGGTGATTTGGGAAATATTGGAAAGAGGGTTATGATTGGTTCTTCCATTCCCAAATTAATGTCTGCTTCCAATGTAATTAGCTGTAAATGCTTGGCAATATGA 1086 0.4346 MDDSKESLTDANEAEATTSTLIAGLPDDISLCCLARIPRKHHSVLKCVSKRWRDLVCSEEWYQYRRKHKLDETWIYALCRGELEDQICCYVLDPNSSRRSWKLIPGLPPRMLKRKGMGFEALGNKLFLFGGCGWSEDATDEAYSYDASTNTWVEAASLSTARCYFASEVLGEKLYAIGGIGSNSSDPHSWDTFDPCTNTWISHRDPNIVPEIEDSVVMDGKIYIRCGKSPVTHRVYGVVYDPSNGTWQHADTELVSGWSGPAVVVDGVLYVLDESSGTRLMMWHKERQEWLPVGRFSPLLTRPPCRVVAVGKTIFVVGRGLSTVVIDVGDLGNIGKRVMIGSSIPKLMSASNVISCKCLAI 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g00048 361 SUPERFAMILY F-box domain 17 68 IPR036047 GO:0005515
Arst2g00048 361 SUPERFAMILY Kelch motif 73 323 IPR015915 GO:0005515
Arst2g00048 361 CDD F-box_AtAFR-like 21 65 - -
Arst2g00048 361 Pfam Kelch motif 114 159 IPR006652 GO:0005515
Arst2g00048 361 Pfam Kelch motif 161 200 IPR006652 GO:0005515
Arst2g00048 361 PANTHER OS02G0202900 PROTEIN 6 331 IPR045887 -
Arst2g00048 361 Gene3D - 64 332 IPR015915 GO:0005515
Arst2g00048 361 SMART fbox_2 25 65 IPR001810 GO:0005515
Arst2g00048 361 SMART kelc_smart 125 172 IPR006652 GO:0005515
Arst2g00048 361 Pfam F-box domain 24 59 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g00048 Arst-Chr2 366160 368856 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g00048 25 270 Miscellaneous Gene Families AT4G33900 28.090 8.20e-20 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g00048 - - zju:107404882 550.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst2g00048 2 366160 368856 Arst2g00048 2 366160 368856 ECH