Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g00045 ATGCAAGCACAACTCTTTTCACTCGCACACTGCACTCTACCTGTGTCCAGATTCCCAAACAATGCAACTCCTCCAAATTTTGCAACTTTTCAACAATCCCATCACTCCTCCAAGCTCAGTTTCAATGTGGGTCTCAATCATTTGCTTCAAAAATCTAATTTTTTGAGTCAAAGCGTACCTGGTTTGATGAGTAGCTGTGATGGTTATGTGGGTGTAGTAGCAGAATGTGGTCCCTTTAATGGAGAAAGTGATGTTGGCGATTGTGATGATGGGTTTTACATAAGAAGGTGTGTTGAGCTTGCAAGAAAAGCTATTGGCTTCACAAGCCCCAATCCAATGGTGGGGTGTGTTATTGTGAAGGATGGGAAAATTGTTGGTCAAGGGTTCCACCCTAAAGCAGGTCAACCGCATGCTGAGGTGTTTGCCTTGAGAGATGCTGGCGATTTGGCGGAGAATGCCACGGCTTATGTGAGCTTAGAACCTTGTAATCATTTTGGAAGGACTCCACCTTGCACTGAAGCTTTAATCAAAGCCAAAGTGAAAAAAGTGGTGGTTGGGATGGTGGATCCAAATCCCCTTGTGGAATCCAAAGGGTTGGCTAGATTGAGAGATGCAGGTATTGAAGTTGTTGTCGGTGTAGAGGAAGAGTTATGCAAGAGCCTTAACGAGGCCTTTGTTCATCGCATGTTAACCGGAAAACCTCTCCTTACATTGAGATATTCTCTTTCTGTCAATTGGAATTTTTCAGACTTACTTGGAGATGGAGTTACAGAATGTGGTGGATACTATTCACGTTTATTGCAAGAATATGATGCAGTGATACTTTCCTCTTCCTTATTCAGTGGGAACATATCAATACCTGCATCTCAAGAACCTGGAGCAAATCAGCCGCTCCGGATTGTAATACATAAGGATTCTAGTTCTTCAAATGAAATTCCACTTGCTGTCAATGAAGTTACTGATAAAGTGATAGTTTTTACTGATAATGGAACAGCAACCACTCTAGAACTGGCCGGAAAAGGAATTGAAACCGTCATTTTGGATCAGATAAATCTAGATGTGATTCTGGACTATTGTAATCGACAAGGGATGTGCAGTGTTCTATTAGATTTGAGGGGAAATTCCAGCGAGTTTGAAGAGTTTGTTAAGGAGGGAATTCAGAAGAAAAACATTAGTAAATTTATGATAGAAATTTTACCTATTTGGAATAGAGGTAGTGAGACAGATCCTCTAATACCGGTAAAAAGGTTAGATCAAGGAATCCAAGTGGAAAATTTGAAGTCCAAGTGTTCAGATCAAAATGTTATAATTGAAGGACATTTTAAATTTTAA 1332 0.4032 MQAQLFSLAHCTLPVSRFPNNATPPNFATFQQSHHSSKLSFNVGLNHLLQKSNFLSQSVPGLMSSCDGYVGVVAECGPFNGESDVGDCDDGFYIRRCVELARKAIGFTSPNPMVGCVIVKDGKIVGQGFHPKAGQPHAEVFALRDAGDLAENATAYVSLEPCNHFGRTPPCTEALIKAKVKKVVVGMVDPNPLVESKGLARLRDAGIEVVVGVEEELCKSLNEAFVHRMLTGKPLLTLRYSLSVNWNFSDLLGDGVTECGGYYSRLLQEYDAVILSSSLFSGNISIPASQEPGANQPLRIVIHKDSSSSNEIPLAVNEVTDKVIVFTDNGTATTLELAGKGIETVILDQINLDVILDYCNRQGMCSVLLDLRGNSSEFEEFVKEGIQKKNISKFMIEILPIWNRGSETDPLIPVKRLDQGIQVENLKSKCSDQNVIIEGHFKF 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g00045 443 CDD Riboflavin_deaminase-reductase 94 206 - -
Arst2g00045 443 Gene3D Cytidine Deaminase, domain 2 86 227 - -
Arst2g00045 443 ProSitePatterns Cytidine and deoxycytidylate deaminases zinc-binding region signature. 137 175 IPR016192 GO:0008270|GO:0016787
Arst2g00045 443 FunFam Riboflavin biosynthesis protein RibD 87 227 - -
Arst2g00045 443 Gene3D Dihydrofolate Reductase, subunit A 228 441 IPR024072 -
Arst2g00045 443 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 88 210 IPR002125 -
Arst2g00045 443 Pfam Cytidine and deoxycytidylate deaminase zinc-binding region 93 187 IPR002125 -
Arst2g00045 443 SUPERFAMILY Dihydrofolate reductase-like 262 437 IPR024072 -
Arst2g00045 443 NCBIfam bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD 95 385 IPR004794 GO:0008835|GO:0009231
Arst2g00045 443 SUPERFAMILY Cytidine deaminase-like 90 229 IPR016193 GO:0003824
Arst2g00045 443 PANTHER CYTOSINE DEAMINASE FAMILY MEMBER 89 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g00045 Arst-Chr2 362607 364860 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g00045 K11752 - gmx:100786393 601.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst2g00045 2 362607 364860 Arst2g00045 2 362607 364860 ECH