Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g04321 ATGATGATGATGCCTTTCAAGATGAGTGAGATGATGGCAACAATGGGTTCAACCTTAGCAAGCTTCATGTTTGTTTGGGCAATCATACGCCAGTATTGTCCATATGAAGTTAGAAGGTTCTTTGAGAAATACACAGAGAGAATTATGGGCTATTTCTACCCTTATATAAGAATCTCCTTCCATGAATTCTTGGGTGATAGGCTCAAGAGAAGTGAGGCTTATGCTGCTGTTGAGGCATACCTCAGTGCCAACACATCAAAGAGTGCAAAGAGACTCAAAGCTGAGATGGGAAAAGATAGCACCAACTTGGTTCTCACCATGGACGAGTATGAGAGAGTCACTGATGATTATGAGGGTGCAAAAGTTTGGTGGTTATCTAGCAAGGTTGCGTCACCACCAAGGTCCATGTCATACTACCCTGAACAAGAGAAGAGGTTCTACAAGCTCAGCTTCCACATGAAGTATAGGGACTTGATCACAAGTTCGTATTTGGAACACGTTATGAGGGAAGGGAAGGAGATTCGGCTGAGGAATCGGCAGAGGAAGTTGTACACAAATAGCCCTGGATACAAGTGGCCAAGTTACAAGCAAACAATGTGGAGCCACATTGTGTTTGAGCACCCTGCAACCTTTGAGACAATGGCTATGGATTGTGAGAAGAAGAAGGAGATCATTGAGGATCTGGTTACTTTTAGCAAGAGCAAAGATTTTTATGCAAGGATTGGGAAAGCTTGGAAGAGGGGTTACCTCCTTTATGGCCCTCCTGGTACTGGAAAATCCACAATGATTGCAGCAATGGCGAATTTGTTAGGATATGATGTGTATGACTTGGAGCTTACAGCAGTTAAGGACAACACTGAGCTGAGGAAGCTCTTGATTGAGACGACGAGTAAGTCTATAATTGTTATTGAGGACATTGATTGCTCGCTTGATCTTACAGGGCAGAGGAAGAAGAAAGGTGGCGACAAGTTGTCGGATGATGAGAGTGAGAAGGTGAGTTTAGAACTTAGGAAAGAAGGGAAGGAAGATGGAGGTTGTGGCAGCAGCAAGGTGACGCTTTCGGGGCTATTGAATTTCATTGATGGGATATGGTCTGCTTGTGGTGGGGAGAGGTTGATTGTGTTCACTACTAACTATGTGGAGAAGCTTGACCCGGCGCTGATTCGAAGGGGCAGGATGGACAAGCACATAGAGTTGTCCCATTGCAGCTTTGATGGATTCAAAGTGCTTGCCAAGAATTACTTGAAGCTCGAAACTCATCCCATGTTCGACACCATTCGGAAGCTGATTGGGGAGGTCAAGATCACTCCAGCCGATGTTGCTGAGAACCTTATGCCTAAGTCTCCACTGGATGATGCAGACAAGTGTCTTTCTTGCTTGATTGAATCACTTGAGGAAGCTGCTGCTGCTATGAAAGCTGAGGAACTGAGGCAGAGCTGCGCGAAAAAGGAAGATGAGGAACTGAAGCATGCCAATGATCACATTAAGGAAGATGAGGGACTAAAGCACACAAATCACACTAAGGAAAATGGTGAGGTATGGGAGGACTTAGAACCTGCTCAAGCAAAAAACCAAAGCCTATAG 1584 0.4489 MMMMPFKMSEMMATMGSTLASFMFVWAIIRQYCPYEVRRFFEKYTERIMGYFYPYIRISFHEFLGDRLKRSEAYAAVEAYLSANTSKSAKRLKAEMGKDSTNLVLTMDEYERVTDDYEGAKVWWLSSKVASPPRSMSYYPEQEKRFYKLSFHMKYRDLITSSYLEHVMREGKEIRLRNRQRKLYTNSPGYKWPSYKQTMWSHIVFEHPATFETMAMDCEKKKEIIEDLVTFSKSKDFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLGYDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKKGGDKLSDDESEKVSLELRKEGKEDGGCGSSKVTLSGLLNFIDGIWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSHCSFDGFKVLAKNYLKLETHPMFDTIRKLIGEVKITPADVAENLMPKSPLDDADKCLSCLIESLEEAAAAMKAEELRQSCAKKEDEELKHANDHIKEDEGLKHTNHTKENGEVWEDLEPAQAKNQSL 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g04321 527 Pfam Domain associated at C-terminal with AAA 34 126 IPR025753 -
Arst1g04321 527 MobiDBLite consensus disorder prediction 480 516 - -
Arst1g04321 527 Pfam ATPase family associated with various cellular activities (AAA) 250 399 IPR003959 GO:0005524|GO:0016887
Arst1g04321 527 PANTHER BCS1 AAA-TYPE ATPASE 14 472 - -
Arst1g04321 527 SMART AAA_5 245 403 IPR003593 GO:0016887
Arst1g04321 527 ProSitePatterns AAA-protein family signature. 371 390 IPR003960 GO:0005524|GO:0016887
Arst1g04321 527 CDD RecA-like_BCS1 224 399 - -
Arst1g04321 527 Gene3D - 397 458 - -
Arst1g04321 527 MobiDBLite consensus disorder prediction 480 527 - -
Arst1g04321 527 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 172 449 IPR027417 -
Arst1g04321 527 Gene3D - 206 396 IPR027417 -
Arst1g04321 527 FunFam AAA-ATPase ASD, mitochondrial 201 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g04321 Arst-Chr1 105885578 105887957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g04321 218 416 Miscellaneous Gene Families AT5G53170 27.136 6.54e-11 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g04321 - - gmx:100798176 820.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g04321 1 105885578 105887957 Arst1g04321 1 105885578 105887957 ECH