Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g04230 ATGAACTCCATGGCTCTAAAATCTTTCGTTGGACTCCGACAATCCTCCTTGGAAACCACCCCTTTCACCGTCCACCAGAAGCCCGCCACCATCAACCTCCCCCAGAAGCTCAAGGTCATTGCTGGAAAAACCAGTCCCAAGCTCCAAGGCCGGAACCTCCGCGTCGCAATCATCGGCGGAGGCCCTGCCGGGGGCTCTGCCGCGGAGACCCTAGCAAAGGGAGGCATCGAAACGTTCCTAATAGAACGGAAAATGGATAACTGCAAGCCGTGCGGGGGCGCCATTCCGCTGTGCATGGTGGGGGAGTTCGACCTGCCATCAGACATCATCGACCGGCGCGTGACGAAGATGAAGATGATATCGCCGTCAAATGTCGCAGTGGACATTGGAAGGACCTTGAAGCCGCACGAGTACATTGGAATGGTGAGGCGTGAGGTTTTGGACGCGTACCTCAGAGATAGGGCAAAAGAGAACGGTGCCACCATTATCAACGGATTGTTCTTGAAGATGGATATGCCTAAAGATAAGAACTCACCTTATTTGCTGCATTATTCTGGGTATGATGGTAAAACCGGTGGGATTGGTGAGAAGAGAACACTGGAGGTCGATGCTGTCATTGGTGCCGATGGGGCTAATTCTAGAGTTGCTAAGGCCATTGATGCTGGTGACTATGAATATGCCATTGCATTTCAGGAGAGGATAAAGATCCCGGATGATAAAATGGTGTATTATGAAAATCTTGCGGAGATGTACGTCGGGGATGATGTATCCCCAGATTTCTACGGTTGGGTGTTTCCAAAATGCGACCATGTTGCAGTTGGGACAGGTACAGTGACACACAAATCAGACATCAAGAAATTCCAGCTGGCAACACGAAAAAGAGCAGAGGACAAGATCACTGGAGGCAAGATCATCCGAGTGGAGGCGCATCCCATCCCCGAACACCCCCGCCCCCGAAGATTATCGGGGAGGGTGGCCCTTGTGGGGGATGCAGCCGGCTATGTGACAAAATGCTCCGGGGAAGGGATCTATTTCGCGGCGAAGAGTGGGAGAATGTGCGCGGAGGCCATTGTGGAAGGATCGGAGAATGGAAAGAGGATGGTGGATGAAGGGGATTTGAGGAAGTACTTGGAGAAGTGGGACAAGACATATTGGCCGACGTATAAGGTGTTGGATGTGCTTCAGAAGGTGTTTTATAGGTCGAATCCGGCCAGGGAGGCGTTTGTGGAGATGTGTGCTGATGAATATGTTCAGAAGATGACATTTGATAGCTATTTGTATAAGACAGTAGTGCCTGGGAATCCATTGGAGGATATCAAGTTGGCCATTAACACCATTGGGAGCTTGGTCAGAGCCAATGCTATCAGGAAGGAAATGGACAAACTCAATGTATGA 1395 0.5075 MNSMALKSFVGLRQSSLETTPFTVHQKPATINLPQKLKVIAGKTSPKLQGRNLRVAIIGGGPAGGSAAETLAKGGIETFLIERKMDNCKPCGGAIPLCMVGEFDLPSDIIDRRVTKMKMISPSNVAVDIGRTLKPHEYIGMVRREVLDAYLRDRAKENGATIINGLFLKMDMPKDKNSPYLLHYSGYDGKTGGIGEKRTLEVDAVIGADGANSRVAKAIDAGDYEYAIAFQERIKIPDDKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKSDIKKFQLATRKRAEDKITGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIVEGSENGKRMVDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKTVVPGNPLEDIKLAINTIGSLVRANAIRKEMDKLNV 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g04230 464 FunFam Geranylgeranyl diphosphate reductase 52 459 - -
Arst1g04230 464 NCBIfam geranylgeranyl diphosphate reductase 54 451 IPR010253 GO:0015979|GO:0015995|GO:0045550
Arst1g04230 464 PANTHER GERANYLGERANYL DIPHOSPHATE REDUCTASE 51 457 - -
Arst1g04230 464 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 322 337 - -
Arst1g04230 464 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 201 216 - -
Arst1g04230 464 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 54 76 - -
Arst1g04230 464 Gene3D - 52 463 IPR036188 -
Arst1g04230 464 SUPERFAMILY FAD/NAD(P)-binding domain 53 435 IPR036188 -
Arst1g04230 464 NCBIfam geranylgeranyl reductase family protein 55 357 IPR011777 GO:0016628
Arst1g04230 464 NCBIfam geranylgeranyl reductase 53 451 IPR011774 GO:0045550
Arst1g04230 464 Pfam Pyridine nucleotide-disulphide oxidoreductase 54 223 IPR023753 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g04230 Arst-Chr1 104695748 104697766 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g04230 K10960 - gmx:100814603 853.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g04230 1 104695748 104697766 Arst1g04230 1 104695748 104697766 ECH