Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g04204 ATGAATTATGAGATGAATTATGAGATTTTTGAAATTTTAGATAAGTGTATTATTCTAGTGTTTGCAGAAGAGGACAAGTTGGCAAATACAAAGTACAAGGTGCCCGAAGATGAGGATATTGTGGGACCGTTTTCCTTTGATGGGCACTTTCCGGGTATTCCAAACCCTAGTGATCGCCAGATCCAGAAGACCTTCAACAACATCAAGATCACCATCCTCTGCGGTTTCGTCACCATCCTTGTCCTTCGCGGCACCATCGGCGTCAACCTCTCCTCCTCCGACGCTGATGCCGTCAACCAGAGCCTCATCGAGGAGACCAACCGCATTCTCGCTGAGATCCGCTCCGACTCCGACCCCGACGACAACGACACCCCTTTCAGCCCCAACGACACCGCCGCCTTCTCCCTAGGCCCCAAGATCTCCGATTGGGATCAACAACGCCACCAATGGCTCCAGCAAAACCCTGAATACCCTAATTTCGTGAGAGGTAAAGCTCGAATCTTGCTCCTCACTGGTTCACCTCCAAAACCCTGTGACAACCCAATTGGTGATCATTACTTGTTGAAGTCGATTAAGAACAAAATTGATTACTGTAGATTGCACAGGATTGAGATTGTGTACAATTTGGCGCATTTGGATAAGGAACTTGCTGGGTATTGGGCCAAATTGCCAATGATTAGAAGGTTGATGTTCTCACACCCTGAGGTGGAGTGGATTTGGTGGATGGATAGTGATGCTTTCTTCACTGACATGGTTTTTGAGCTTCCTTTGTCTAAGTATGATGATTACAATTTGGTACTTCATGGTTACCCTGATTTGTTGTTTGAGCAGAAGTCTTGGATTGCTGTGAATACCGGCAGCTTCTTGTTTCGGAATTGCCAGTGGTCTTTAGATTTGCTTGATGATTGGGCTCCCATGGGCCCCAAAGGTCCAGTGAGGGAGGAGGCTGGTAAGGTCTTAACTGCAAATTTGAAGGGTCGCCCGGCATTTGAGGCCGATGATCAATCTGCATTGATATACCTTTTGTTGTCCAAAAAGGAGAAGTGGATGGATAAGGTTTTCCTTGAGAATTCTTACTACCTGCACGGCTACTGGGCTGGCTTGGTTGACCGGTATGAAGAGATGGTTGAGAAGTACCATCCCGGATTAGGAGATGAGAGGTGGCCTTTCGTGACACATTTTGTGGGATGTAAACCTTGTGGGAGCTATGGAGATTATCCTGTTGAGAGGTGCCTCAGTAGTATGGAGAGGGCTTTCAATTTTGCTGATAATCAGGTGCTCAAGCTCTATGGTTTCCGTCACCGTGGCTTGTTGAGCCCTAAGATCAAGAGAATAAGAAATGAGACAGTTACTCCTTTGGAGTATGTAGATCAGTTTGATATCAGAAGACATTCTACAGTGAGCAGTGAATCAAAAAGCCAGTGA 1425 0.4632 MNYEMNYEIFEILDKCIILVFAEEDKLANTKYKVPEDEDIVGPFSFDGHFPGIPNPSDRQIQKTFNNIKITILCGFVTILVLRGTIGVNLSSSDADAVNQSLIEETNRILAEIRSDSDPDDNDTPFSPNDTAAFSLGPKISDWDQQRHQWLQQNPEYPNFVRGKARILLLTGSPPKPCDNPIGDHYLLKSIKNKIDYCRLHRIEIVYNLAHLDKELAGYWAKLPMIRRLMFSHPEVEWIWWMDSDAFFTDMVFELPLSKYDDYNLVLHGYPDLLFEQKSWIAVNTGSFLFRNCQWSLDLLDDWAPMGPKGPVREEAGKVLTANLKGRPAFEADDQSALIYLLLSKKEKWMDKVFLENSYYLHGYWAGLVDRYEEMVEKYHPGLGDERWPFVTHFVGCKPCGSYGDYPVERCLSSMERAFNFADNQVLKLYGFRHRGLLSPKIKRIRNETVTPLEYVDQFDIRRHSTVSSESKSQ 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g04204 474 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 5-RELATED-RELATED 58 458 IPR008630 GO:0016020|GO:0016757
Arst1g04204 474 Pfam galactosyl transferase GMA12/MNN10 family 164 402 IPR008630 GO:0016020|GO:0016757
Arst1g04204 474 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 164 309 IPR029044 -
Arst1g04204 474 FunFam xyloglucan 6-xylosyltransferase 2 163 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g04204 Arst-Chr1 104354707 104357269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g04204 54 473 Glycosyltransferase AT5G07720 80.095 0.0 735
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g04204 K08238 - gmx:100793238 803.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g04204 1 104354707 104357269 Arst1g04204 1 104354707 104357269 ECH