Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g04146 ATGGATTCGAACGCCATGGCACAACTCCAAAGACCTTCAACCGAAACCCCAACCCTGCTCGATTCTCTGGGCGAAGAAATCATCAGAATTGTAGCCCCAGTCTCAATCTGCATGTTCCTCGTTGTAATCCTCGTCTCCATTCTCAACACGGGTGACTCTTCCTTCTCCGTTTCCAGCATCGCCACCATTGCGTACACCGAGACAACCTCCGATTCCTCCTGGGACAAGTTCCTAGGTGCCCTGCTCAACTCCCTCGCCTTCGTCGTCGTCGTCACCGTGGCTACCTTCGTCCTCGTCCTCCTCTTCTATTTCAGGTGCACTGGCTTCCTCAAAATCTACATGGGTTTCTCCGCTTTCGTCGTTCTAGGGTTCCTCGGCGGTGAAGTTTTCATCTTTTTGATTCAGCATTTTAGTACCCCAATTGATTGCTTCACTTTCTTGTTGCTTCTGTGTAATTTTGCTGTTGTTGGTGTTATGGCTGTCTTTATGTCGAAAATGGCTATTATTGTTACTCAGAGTTACTTGGTTGTTATTGGGATTCTTGTTGCTTATTGGTTCACTATGTTGCCTGAATGGACCACTTGGGCCATGCTTGTTGCCATGGCATTGTATGATCTTGCTGCCGTTTTGTTGCCTATTGGTCCCTTGAGGCTTCTCGTTGAGCTCGCCATATCGCGGGACGAGGAGATTCCGGCTTTGGTTTACGAAGCTAGGCCTGTGAATGTTGAGAATTTGGATCCTAGGGTTGCTGTTGCTCAGAGGAGGCTGTGGAGAGAGAGGAGGGTTACCGAGAATTCAAATCTCCGGGGTGATGCTAATGTGAATGTTAGTAATAATAATGCCTTAGGTCTTGGTGCCAATGCTGAGTTGAACCCTGGTTCGGATTCAAACAGTAATAATCCCAGTTCGGCTGGGGAAGATGCTATTTTGGATTCGAATTTGGGTTCTAGTACTTCTTATGGGATCTATAGTGACAGGAATTTGGTTAGAGCTGAAGAGGGGCGAGTTCAGGAGACCAATTCAGAGATTACTACCCCATTGATTGGTCACGGAGTGAATGTTCGGATACATAGCAGAGCAGAAAATGTGGATGCATCAGATGAGAATTTGATGTTGGAGGGAATTGGATTGGCTTCATCCGGCGCAATCAAGTTAGGGCTGGGCGATTTCATCTTCTATAGTGTTTTGGTTGGCAGGGCTGCAATGTATGATTTTATGACTGTGTATGCTTGTTATCTCGCTATCATTGCTGGTCTGGGGATAACACTGATGCTTTTGGCTTTTTATCAGAAGGCTTTGCCTGCTCTTCCCGTGTCAGTCGCACTGGGGGTGCTGTTTTATTTCTTGACCAGGCTCTTACTTGAAGTGTTTGTAGTACAATGTTCCATGAATCTTCTGATGTTTTAA 1407 0.4641 MDSNAMAQLQRPSTETPTLLDSLGEEIIRIVAPVSICMFLVVILVSILNTGDSSFSVSSIATIAYTETTSDSSWDKFLGALLNSLAFVVVVTVATFVLVLLFYFRCTGFLKIYMGFSAFVVLGFLGGEVFIFLIQHFSTPIDCFTFLLLLCNFAVVGVMAVFMSKMAIIVTQSYLVVIGILVAYWFTMLPEWTTWAMLVAMALYDLAAVLLPIGPLRLLVELAISRDEEIPALVYEARPVNVENLDPRVAVAQRRLWRERRVTENSNLRGDANVNVSNNNALGLGANAELNPGSDSNSNNPSSAGEDAILDSNLGSSTSYGIYSDRNLVRAEEGRVQETNSEITTPLIGHGVNVRIHSRAENVDASDENLMLEGIGLASSGAIKLGLGDFIFYSVLVGRAAMYDFMTVYACYLAIIAGLGITLMLLAFYQKALPALPVSVALGVLFYFLTRLLLEVFVVQCSMNLLMF 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g04146 468 SMART psh_8 78 454 IPR006639 GO:0004190|GO:0016020
Arst1g04146 468 PRINTS Presenilin family signature 188 195 IPR001108 GO:0004190|GO:0016020|GO:0016485
Arst1g04146 468 PRINTS Presenilin family signature 31 41 IPR001108 GO:0004190|GO:0016020|GO:0016485
Arst1g04146 468 PRINTS Presenilin family signature 205 222 IPR001108 GO:0004190|GO:0016020|GO:0016485
Arst1g04146 468 Gene3D Presenilin 363 460 IPR042524 -
Arst1g04146 468 FunFam Presenilin 357 459 - -
Arst1g04146 468 Pfam Presenilin 24 458 IPR001108 GO:0004190|GO:0016020|GO:0016485
Arst1g04146 468 MobiDBLite consensus disorder prediction 285 310 - -
Arst1g04146 468 PANTHER PRESENILIN 13 468 IPR001108 GO:0004190|GO:0016020|GO:0016485
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g04146 Arst-Chr1 103479321 103481219 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g04146 1 468 Miscellaneous Gene Families AT2G29900 58.723 6.78e-160 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g04146 K04505 - gmx:100799643 603.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g04146 1 103479321 103481219 Arst1g04146 1 103479321 103481219 ECH