Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g04140 ATGGCTAACCCAACCAGCTTTTCTCTTGCGGTATTTCTATTGTTTGTTATTGGATGCACTGCAAGGCCTATTTATCCACTTCCTAGTCAAGATGATTACAGAATTCGGCAGCCTCTACAAACTTTCCGGCCATACAACATTGCGCACCGAGGCGCAAATGGAGTGATTCCTGAAGAAACTCGTCCTGCATACTTGAAAGCTATTGAAGATGGTGCAGACTTCATTGAAACTGATATCTTATCTTCCAAAGATGGTGTTCTTATATGTTTCCACGATGTTACCCTTGATAATACCACTGACATTGCGAAGTACAAAAAGTTTGAAAATCGTAAAAGGACATACGAAGTCGAAGGGGTCAACCGCACTGGATTTTTTACTGTTGATTTCACAATTGAGGAATTAAAGTTATTAAGGGTGAATCAGAGGTATAGCTTCAGGGATAAACAGTATAATGGAAAATTTGGAATCATCACTTTCGAAGAGTTCATTTCCATTGCATTGGATGCAGATAGAGTTGTTGGAATATATCCAGAGATAAAGAATCCAGTTTTTATCAATCAGCATGTGAAATGGCCAAATGGCAAAAGATTTGAAGACATATTTGTCAAGACACTTCAGAAATATGGATACAAGGGTTCATACTTGTCAAAAGACTGGCTAAAACAACCTGTATTTATTCAGTCATTTGCTCCAACATCACTTGTGTATATATCAAATCAAACGGATTTGCCCAAGGTTTTCTTAATTGATGATGTTACTGTTTCGACGCAAGACACTAATCAGTCATATTGGGAAATCACATCCGATAAATACCTAAACTACATAAAGAATTACGTTGTTGGAATTGGACCTTGGAAGGACACAATAGTACCTGTGGCAAAGAATTATTTGGAAGAGCCTAGTGATCTTGTTGCCAGGGCACATGCTCATAACCTTCAGGTGCATCCATATACTTACCGAAATGAGAACCAGTTTTTGCACTTCAACTTTAGTCAAGATCCTTATAAAGAGTATGATTATTGGATCAACAAAATAGGAGTTGATGGCCTCTTCACAGATTTCACAGGAAGTCTTCACAATTTTCAGGAATGGACCTCCAGTGATACAAAGACTGAATCCAATATATTGCATAAAATTGCTCTTTTGGTCTCTCCTTATAATAACTAA 1167 0.3753 MANPTSFSLAVFLLFVIGCTARPIYPLPSQDDYRIRQPLQTFRPYNIAHRGANGVIPEETRPAYLKAIEDGADFIETDILSSKDGVLICFHDVTLDNTTDIAKYKKFENRKRTYEVEGVNRTGFFTVDFTIEELKLLRVNQRYSFRDKQYNGKFGIITFEEFISIALDADRVVGIYPEIKNPVFINQHVKWPNGKRFEDIFVKTLQKYGYKGSYLSKDWLKQPVFIQSFAPTSLVYISNQTDLPKVFLIDDVTVSTQDTNQSYWEITSDKYLNYIKNYVVGIGPWKDTIVPVAKNYLEEPSDLVARAHAHNLQVHPYTYRNENQFLHFNFSQDPYKEYDYWINKIGVDGLFTDFTGSLHNFQEWTSSDTKTESNILHKIALLVSPYNN 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g04140 388 CDD GDPD_ScGlpQ1_like 44 355 - -
Arst1g04140 388 Pfam Glycerophosphoryl diester phosphodiesterase family 49 356 IPR030395 GO:0006629|GO:0008081
Arst1g04140 388 SUPERFAMILY PLC-like phosphodiesterases 44 360 IPR017946 GO:0006629|GO:0008081
Arst1g04140 388 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 40 372 - -
Arst1g04140 388 Gene3D Phosphatidylinositol (PI) phosphodiesterase 42 361 IPR017946 GO:0006629|GO:0008081
Arst1g04140 388 FunFam Glycerophosphodiester phosphodiesterase GDPD5 42 361 - -
Arst1g04140 388 ProSiteProfiles GP-PDE domain profile. 44 362 IPR030395 GO:0006629|GO:0008081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g04140 Arst-Chr1 103447621 103451926 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g04140 14 386 Acyl Lipid Metabolism Gene Families AT1G74210 72.074 0.0 568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g04140 K01126 - gmx:100778145 659.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g04140 1 103447621 103451926 Arst1g04140 1 103447621 103451926 ECH