Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g04023 ATGGTTGAAGCCTTCGACGACAATAGTAATAATAAGCTCCCTGAGCTCAAATTGGACACGAAGCAAGCCCAAGGGTTTCTATCATTTTTCAAAACCCTACCTAATGATTCGAGGGCCATCCGGTTTTTTGATCGCAGGGACTACTATACTGCTCATGGTGAAAATGCAACTTTCATTGCGAAGACCTACTACCACACTACTACTGTCTTGCGGCAACTGGGTAGTGGATCGGATCCTCTTTCAAGTGTAAGTGTCAGTAGGACCATGTTTGAAACAATTGCTCGTGATCTACTTTTGGAGAGAACAGACCATACCCTTGAACTCTATGAGGGTAGTGGTTCTAACTGGAGATTGGTCAAAAGTGGAACGCCTGGCAATATTGGCAGTTTTGAGGATGTTTTGTTTGCTAACAGTGAGATGCAGGATTCTCCAGTTGTTGTTGCATTATCACTTAACTATCGTGAAAATGGGTGCACTGTTGGGTTATCATTTGTTGATTTAACTAAGAGAGTACTTGGGATGGCTGAATTCCTTGATGACAGTCACTTCACGAATGTGGAGTCGGCATTAGTTGCTCTTGGCTGCAAAGAATGCCTTCTTCCTAGTGAGAGTGGCAAATCTACTGAAAATAGAATGCTGTGCGATGCGTTGACTAAATGTGGTGTGATGTTAACTGAGAGAAAGAAATCCGAGTTTAAAACCAGGGATCTGGTACAGGATCTTGGCAGACTTGTTAAAGGTTCTATTGAACCAGTTCGAGACTTAGTGTCTGGATTTGAGTTTGCACCTGGGGCTTTAGGGGCATTACTATCATATGCTGAGTTACTTGCAGATGAGAGCAATTACGGGAATTTTACTCTTCGTAGGTACAGTCTTGACAGTTATATGAGATTAGATTCTGCAGCCATGAGGGCACTCAATGTTCTTGAAAGCAAAACCGATGCAAACAAAAATTTTAGTTTGTTCGGTCTAATGAATAGGACCTGTACAGCCGGAATGGGGAAACGGTTATTGCACATGTGGCTAAAACAGCCCTTGTTGAATGTTAATGAAATTAACTTGAGACTTGATGTTGTACAAGCATTTGTAGAGGATACTGTACTTCGGCAAGATCTGAGGCAGCATTTAAGAAGAATATCAGACATTGAGCGGTTGGTACACAATCTTCAGAAGCGGAGAGCTGGTCTTGCACATATTGTTAAACTTTATCAGTCAAGTATAAGACTACCTTATATCAAAAGCGCCCTAGAAAGATATGATGGACCATTTTCCTCAATGATGAAGAGCAGGTACTTGGAACCTCTTGAGTTGTGGACAGATGATGATCACCTAAATAAATTCATTGGCCTTGTAGAAGCTTCTGTTGACCTTGATCAACTGGAGAACAGAGAATACATGATTTCCTCAAGTTATGACCCTACACTAACTAAATTGAAGGAGCAGCAGGAGTCATTAGAGAATCAAATACATAAATTGCATAGACAAACTGCTGATGATCTTGATCTTCCTGTAGACAAGGCATTAAAGTTAGACAAGGGGACACAATTTGGACATGTTTTCAGAATCACAAAGAAGGAAGAGCCCAAAATAAGGAAGAAGCTTAACTCCCAGTTCGTTGTACTGGAAACACGTAAAGATGGAGTGAAATTTACCAACACAAAGCTAAGGAAACTTGGGGACCAGTATCAACAGGTACTTGAGGAGTACAAGAGCTGTCAGAAAGAGTTGGTTAATAGAGTAGTTCAAACTGCTGCAACATTCTCAGAGGTGTTTGAATCTTTAGCCGAATTGATTTCTGAACTGGATGTGTTATTAAGCTTTGCTGATTTGGCTTCCAGCTGCCCGACACCTTATACAAGGCCTGAAATCACTTCATCGGATGAAGGAGATATTATTTTAGAAGGCAGCAGACACCCTTGTGTAGAGGCACAAGACTGGGTGAATTTTATACCAAATGATTGTAAGCTTATCAGAGAAAAAAGTTGGTTTCAAATAATAACAGGGCCTAACATGGGTGGGAAATCAACATTCATCCGCCAGGTGGGAGTGAACATTTTGATGGCCCAAGTTGGCTGCTTTGTTCCTTGTGATAATGCCAGCATATCTGTTCGTGATTGCATTTTTGCCCGTGTTGGTGCTGGTGACTGTCAACTTCGAGGAGTTTCTACCTTCATGCAAGAAATGCTTGAGACTGCATCAATATTAAAAGGAGCTACAGTCAAGTCCTTGATAATCATTGATGAATTGGGACGTGGGACATCAACTTATGATGGATTTGGTCTTGCTTGGGCCATTTGTGAGCACATTGTTGAAGTAATCAAAGCACCTACTTTGTTTGCAACCCACTTTCATGAACTGACTGCATTATCCCTTGAAAATGCAAGTGATGATCAGCAGAAGCGAATTGTTGGTGTTGCAAACTATCATGTTAGCGCGCATATTGATGCTTCAACTCGCAAGCTAACTATGCTATACAAGGTTGAACCAGGAGCTTGTGACCAAAGTTTTGGTATTCATGTTGCCGAGTTTGCAAATTTTCCAGAAAGTGTTGTAGCCCTAGCCAGAGAAAAGGCAGCAGAGTTGGAAGATTTTTCTCCCTCTGCACTATCCTTAACTGACACCACAAATGAGTTTGGTTCTAAGCGCAAGAGAGTATATGAACCCGATGAAATGTCGCAAGGCGTTACAAAGGCTCGCCAAATCCTTGAAGCGTTTGTTGATTTGCCTTTAGAAACCATGGATAAAATGCAAGCTTTGCAGGAACTAAGGAAGTTAAAAGATAATTTAGAGAAGGATGCTGAAAACTGTCGATGGCTGCAACAATTCTTGTAG 2832 0.4135 MVEAFDDNSNNKLPELKLDTKQAQGFLSFFKTLPNDSRAIRFFDRRDYYTAHGENATFIAKTYYHTTTVLRQLGSGSDPLSSVSVSRTMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPGNIGSFEDVLFANSEMQDSPVVVALSLNYRENGCTVGLSFVDLTKRVLGMAEFLDDSHFTNVESALVALGCKECLLPSESGKSTENRMLCDALTKCGVMLTERKKSEFKTRDLVQDLGRLVKGSIEPVRDLVSGFEFAPGALGALLSYAELLADESNYGNFTLRRYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLNVNEINLRLDVVQAFVEDTVLRQDLRQHLRRISDIERLVHNLQKRRAGLAHIVKLYQSSIRLPYIKSALERYDGPFSSMMKSRYLEPLELWTDDDHLNKFIGLVEASVDLDQLENREYMISSSYDPTLTKLKEQQESLENQIHKLHRQTADDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLNSQFVVLETRKDGVKFTNTKLRKLGDQYQQVLEEYKSCQKELVNRVVQTAATFSEVFESLAELISELDVLLSFADLASSCPTPYTRPEITSSDEGDIILEGSRHPCVEAQDWVNFIPNDCKLIREKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDNASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATVKSLIIIDELGRGTSTYDGFGLAWAICEHIVEVIKAPTLFATHFHELTALSLENASDDQQKRIVGVANYHVSAHIDASTRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVALAREKAAELEDFSPSALSLTDTTNEFGSKRKRVYEPDEMSQGVTKARQILEAFVDLPLETMDKMQALQELRKLKDNLEKDAENCRWLQQFL 943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g04023 943 SUPERFAMILY DNA repair protein MutS, domain III 299 613 IPR036187 -
Arst1g04023 943 PANTHER DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER 67 863 IPR045076 GO:0005524|GO:0006298|GO:0030983|GO:0140664
Arst1g04023 943 SUPERFAMILY DNA repair protein MutS, domain II 157 311 IPR036678 GO:0005524|GO:0006298|GO:0030983
Arst1g04023 943 CDD ABC_MSH2_euk 632 862 IPR032642 GO:0005524
Arst1g04023 943 Gene3D MutS, connector domain 124 293 IPR036678 GO:0005524|GO:0006298|GO:0030983
Arst1g04023 943 FunFam DNA mismatch repair protein MSH2 619 939 - -
Arst1g04023 943 Pfam MutS family domain IV 471 568 IPR007861 GO:0005524|GO:0006298|GO:0030983
Arst1g04023 943 Pfam MutS domain II 145 285 IPR007860 GO:0005524|GO:0006298|GO:0030983
Arst1g04023 943 PIRSF MSH2 8 943 IPR011184 GO:0005524|GO:0006298|GO:0030983
Arst1g04023 943 FunFam DNA mismatch repair protein 124 293 - -
Arst1g04023 943 PIRSF MSH2 8 943 IPR011184 GO:0005524|GO:0006298|GO:0030983
Arst1g04023 943 Coils Coil 912 939 - -
Arst1g04023 943 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 618 863 IPR027417 -
Arst1g04023 943 Coils Coil 555 575 - -
Arst1g04023 943 FunFam DNA mismatch repair protein MSH2 515 618 - -
Arst1g04023 943 Coils Coil 475 495 - -
Arst1g04023 943 Gene3D DNA repair protein MutS, domain I 9 123 IPR016151 GO:0005524|GO:0006298|GO:0030983
Arst1g04023 943 FunFam DNA mismatch repair protein 9 123 - -
Arst1g04023 943 SMART DNAend 316 644 IPR007696 GO:0005524|GO:0006298|GO:0030983
Arst1g04023 943 Gene3D - 619 940 IPR027417 -
Arst1g04023 943 Gene3D - 524 618 - -
Arst1g04023 943 Gene3D - 296 523 - -
Arst1g04023 943 Pfam MutS domain I 25 130 IPR007695 GO:0005524|GO:0006298|GO:0030983
Arst1g04023 943 SMART mutATP5 661 859 IPR000432 GO:0005524|GO:0006298|GO:0030983
Arst1g04023 943 ProSitePatterns DNA mismatch repair proteins mutS family signature. 742 758 IPR000432 GO:0005524|GO:0006298|GO:0030983
Arst1g04023 943 Pfam MutS domain III 302 608 IPR007696 GO:0005524|GO:0006298|GO:0030983
Arst1g04023 943 Coils Coil 372 392 - -
Arst1g04023 943 Pfam MutS domain V 664 862 IPR000432 GO:0005524|GO:0006298|GO:0030983
Arst1g04023 943 FunFam DNA mismatch repair protein 296 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g04023 Arst-Chr1 101915531 101921432 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g04023 K08735 - gmx:100792272 1695.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g04023 1 101915531 101921432 Arst1g04023 1 101915531 101921432 ECH