Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g04014 ATGGGTACTGGAGCAATCGGAGGGAGCCGTTTCACCAATGGGGAAGCTGAGAACAGTGTTCACAAGCAAGCTGAACAAGCTCCCATTGAACGGTTTGTAGGTAGAAGCCAAGACTTGCTCTCTGATGGAAGCAATGCAGTAACGGTAGACCCTGGAGAACAGTCACGCCCACCCGTAGCCCCTGCAAAGAGCCACCAGAAGGATCTAACATTTCAGGATATGTATCTAAACCAATATGCGTTCGATGATGAGGACGACGATGACAGTGATTGGGAGCCCTTTCAACTGCCAGTTAGCAGGGTCGAAGTTATCAAGTGGTTCTGTAAAAATTGTACAATGGCTAACCTTGACGGCGTCGTTCTTTGTGATATATGTGGGGAGCATAAGGATTCTAAAATCGTAAATTTTGGGTTTTTCGCTTCTTCCTTAGCAGATGATGATGATCTGAATGGGGTCCAGCCAAAAATAAAAGGGCTAACAGATTGTGGCTCACAGGATTCAGAAACAATTAGTTCTACAGCAATAGGCTTTGATGAGAGAATGTTATTACATGCAGAAGTTGAAAAGAAACCAAGTCTTCATCCTGAAAGGCCAGATCGTCTTCGAGCCATTGCTGCTAGTCTTGCTAGAGCTGGTATATTTCCAGGAAGATGCTTTCCAATTCCTGCTAGAGAAATAACTCGAGAAGAACTTGTTATGGTTCATTCTTTGGAGCAAATTAATTCTGTGGAAGTTACAAGCCAGGCATTTTCTAGCTATTTCACTGCAGACACATATGCCAATGAGCATTCCGCCCTTGCTGCTAGGTTGGCTGCTGGGTTGTGTGCTGATCTGGCATCAGCAATTGTTTCTGGCCATGCCAAAAACGGATTTGCTTTGGTTAGGCCTCCTGGTCATCATGCTGGTGTAGCACATGCAATGGGGTTCTGCCTTCACAATAATGCTGCTGTAGCAGCATTGGCAGCTCAGGCAGCAGGGGCTAGGAAGGTGCTAATTTTAGACTGGGACGTTCATCATGGAAACGGTACACAGGAAATTTTTAATAGAAACAAATCGGTCTTGTATATATCATTGCATAGACACGAGAGAGGTTTGTTTTATCCTGGTACTGGAGCTGCTGATGAGGTTGGTAGTAGGGGTGCTGAAGGATTTTGTGTAAATATTCCATGGAGTCGAGGAGGAGTTGGTGATAATGATTATATTTTTGCATTTCAGAATGTTGTCCTTCCTATAGCTTCTGAGTTTGCTCCAGATTTCACCATAATATCCGCAGGTTTTGATGCTGCAAGAGGTGATCCCCTAGGATGTTGCGATGTTACTCCGTCAGGCTATGCACAGATGACACATATGTTGAACACCCTTTCTGGTGGAAAAATGCTTGTTATTCTCGAAGGCGGCTACAATCTTCGTTCCATATCTTCATCTGCCACTGCAGTAATCAAGGTATTGCTGGGTGATAATCCTGAATGTGAACCGGAAAACAGCGTTCCTTCTGCAGCCGGCCTGCAAACTGTCATGAATGTCCTCAAAATTCAGAAGAATTATTGGCCATCCTTGGGACCCATCTTTACTGATGTGCAGTCACAATGGAGAATTGAGTATCGCAGACTAAAGAGAAAACGTGTCAAGAAGCAGCGCAGAGTCCTGGCTCCTATGTGGTGGCAGTGGGGTAGAAAAAGTTTGTTGTTCCATTTCTTGAATGGCCACCTTAGTGTAAAATCAAAATGA 1728 0.445 MGTGAIGGSRFTNGEAENSVHKQAEQAPIERFVGRSQDLLSDGSNAVTVDPGEQSRPPVAPAKSHQKDLTFQDMYLNQYAFDDEDDDDSDWEPFQLPVSRVEVIKWFCKNCTMANLDGVVLCDICGEHKDSKIVNFGFFASSLADDDDLNGVQPKIKGLTDCGSQDSETISSTAIGFDERMLLHAEVEKKPSLHPERPDRLRAIAASLARAGIFPGRCFPIPAREITREELVMVHSLEQINSVEVTSQAFSSYFTADTYANEHSALAARLAAGLCADLASAIVSGHAKNGFALVRPPGHHAGVAHAMGFCLHNNAAVAALAAQAAGARKVLILDWDVHHGNGTQEIFNRNKSVLYISLHRHERGLFYPGTGAADEVGSRGAEGFCVNIPWSRGGVGDNDYIFAFQNVVLPIASEFAPDFTIISAGFDAARGDPLGCCDVTPSGYAQMTHMLNTLSGGKMLVILEGGYNLRSISSSATAVIKVLLGDNPECEPENSVPSAAGLQTVMNVLKIQKNYWPSLGPIFTDVQSQWRIEYRRLKRKRVKKQRRVLAPMWWQWGRKSLLFHFLNGHLSVKSK 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g04014 575 PRINTS Histone deacetylase superfamily signature 329 344 IPR000286 -
Arst1g04014 575 PRINTS Histone deacetylase superfamily signature 296 319 IPR000286 -
Arst1g04014 575 PRINTS Histone deacetylase superfamily signature 417 427 IPR000286 -
Arst1g04014 575 Pfam Histone deacetylase domain 194 482 IPR023801 -
Arst1g04014 575 ProSitePatterns Zinc finger RanBP2-type signature. 106 125 IPR001876 -
Arst1g04014 575 PANTHER HISTONE DEACETYLASE 9-RELATED 165 529 IPR017320 GO:0000118|GO:0004407|GO:0006325|GO:0016575
Arst1g04014 575 Gene3D Histone deacetylase domain 170 522 IPR037138 -
Arst1g04014 575 MobiDBLite consensus disorder prediction 1 28 - -
Arst1g04014 575 MobiDBLite consensus disorder prediction 41 65 - -
Arst1g04014 575 SUPERFAMILY Arginase/deacetylase 172 519 IPR023696 -
Arst1g04014 575 FunFam Histone deacetylase 15 166 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g04014 Arst-Chr1 101812556 101820582 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g04014 - - gmx:100804724 800.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g04014 1 101812556 101820582 Arst1g04014 1 101812556 101820582 ECH