Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03826 ATGGAGGAAGTTAACGTTGTAGAAACTAAGGATGGAACTGTTTCAGTAGCTTCTGCATTTGCTGGTCACCAAGAAGCTGTGCAGGATAGGGACCATAAATTTCTAAGAAAAGCAGTTGAAGAAGCATACAAAGGAGTAGATTCTGGACATGGAGGTCCTTTTGGTGCTGTTATAGTTTGCAATGATGAAGTAGTAGCTAGTTGTCACAACATGGTTCTTAGTCATACGGACCCTACCGCACATGCAGAAGTTACAGCAATAAGGGAGGCTTGTAAGAAGCTTAAGAAGATAGAACTGTCAGATTGTGAAATATATGCTTCTTGTGAACCTTGCCCCATGTGCTTCGGTGCAATCCACCTTTCTCGAATTAAGAGGTTGGTTTATGGAGCGAAGGCCGAAGCAGCAATCGCTATTGGGTTTGATGACTTTATCGCAGATGCATTGCGAGGTACCGGATTCTATCAGAAAGCACAGCTGGAGATCAAAAGAGCTGATGGCAACGAGGCCATGATCGCGGAAGAGGTGTTCGAGAAAACGAAGGAAAAGTTCCGAATGTATTAG 561 0.4385 MEEVNVVETKDGTVSVASAFAGHQEAVQDRDHKFLRKAVEEAYKGVDSGHGGPFGAVIVCNDEVVASCHNMVLSHTDPTAHAEVTAIREACKKLKKIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGAKAEAAIAIGFDDFIADALRGTGFYQKAQLEIKRADGNEAMIAEEVFEKTKEKFRMY 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03826 186 Gene3D Cytidine Deaminase, domain 2 30 186 - -
Arst1g03826 186 ProSitePatterns Cytidine and deoxycytidylate deaminases zinc-binding region signature. 81 118 IPR016192 GO:0008270|GO:0016787
Arst1g03826 186 Pfam Cytidine and deoxycytidylate deaminase zinc-binding region 30 129 IPR002125 -
Arst1g03826 186 PANTHER CYTOSINE DEAMINASE FAMILY MEMBER 23 133 - -
Arst1g03826 186 CDD nucleoside_deaminase 35 142 - -
Arst1g03826 186 SUPERFAMILY Cytidine deaminase-like 24 144 IPR016193 GO:0003824
Arst1g03826 186 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 29 143 IPR002125 -
Arst1g03826 186 FunFam tRNA-specific adenosine deaminase 29 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03826 Arst-Chr1 99421446 99423828 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03826 - - cam:101506670 346.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g03826 1 99421446 99423828 Arst3g03155 3 57261532 57266243 PCT