Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03356 ATGAGGATCGACTTGGATTCCATCGCTCGCAGAGTCGAAGTTGACAATCGCATTCCCCTTCGTTATTACTATCGCATCGCCGATAACCTCCTCAAGCAGGCAAGTATCTACCGGCAGGAGAACAATATAGTTGACTTGTATATCATACTTCTTAGATTTTCAAGTTTGGTTTCTGAGACTATACCATACCATCGAGATTATCAAGCTTCACTTCATAATGAAAGAGCAGCATATAAGAAGAGATTGCTAGCTGTAATAGATGAGCTTGAAGCATTGCGGCCTGAATTTAAACTCCTTGTGAACAAATTGAATAATTCACATCTTGAAGCTCCATTGCCTGGAGAAAACAGCTTTAATATGGCTTTGCCGAGTTCAGCAAATTCGTCCTTGGAATGGCCTCCTGTCAATAAAAGCTCTAACTCCCCCATGGATTTTCGACAGTCTGCTGGATTGGGTTCACACTCTTCATGGAAATATAACAATAATGTCTCATTTTCAAATTCCATCCCCATTGACAAGCAGTTTCAGAAACTATCCCTTAGTGTACCTCCTCCAAAGAAGGAGACTTTGTCTAGACACTCATTCTTAGGGCCAAGTGGTCTTCGGGGCCAATGGCTTGGACCTAGTGCAGAAATTAAGGTTCAATATCCAAGCAGTACTGATCTGACACACGTCAAAGATTCAAGCTTGAATCAGGCTGGGCAATATGATCTTGTGGCAATTAAAGAATCGGATCAAGGACCAGCTGCATCCACAATGAACTCAGTTCTCTCATTGGATGACGGAAGATGGTCGCATCCTGCTGTTGAGTCCTGTTCTCCTGTTGTAACTGAATCAAGGGAGGACTCCTTCCAGTTGCTCAAACAACCTTTGCCACCTCCTGTTCTTGCTCAGGTGTATCCCGAGTCTTCTCCCATTCCTCCTTCAAAAGTTGCAGATCCAAGGCCTGGACCAGCTAAATCTTCTCAGGATTCTGGACCTGGTCCCAGTACATACCAACACCTACATATTCCTGTGAAAATGATGGAAGATTTTTTGAGACTGGCTTCCGAAAACACACGGAAAAACTTAGAGACATGTGGTGTTCTTGCAGGGTCCTTGAAAAACAGGGTTTTCCATATCACTACACTTATTATCCCAAAGCAGGAGTCAACTTCAGACTCGTGTTCAACATTGAATGAAGAAGAAATATTTAGTTCAGGACAGCTTATCACTCTTTCTTTTAGGCTGGATACATACACACCCATCACAAACTTGTTTCATGTCATCCGTGGACCTGCACACCCATTACTCATACCAGATAATGTTACCGGAGGCAATTGCAATTGTCATGGCTCCTACAGATACAACAAGTCCACATGGCATATTTCATCTATCCGATCCAGGGGGTGTGTCTGTAATTCGTAA 1407 0.4307 MRIDLDSIARRVEVDNRIPLRYYYRIADNLLKQASIYRQENNIVDLYIILLRFSSLVSETIPYHRDYQASLHNERAAYKKRLLAVIDELEALRPEFKLLVNKLNNSHLEAPLPGENSFNMALPSSANSSLEWPPVNKSSNSPMDFRQSAGLGSHSSWKYNNNVSFSNSIPIDKQFQKLSLSVPPPKKETLSRHSFLGPSGLRGQWLGPSAEIKVQYPSSTDLTHVKDSSLNQAGQYDLVAIKESDQGPAASTMNSVLSLDDGRWSHPAVESCSPVVTESREDSFQLLKQPLPPPVLAQVYPESSPIPPSKVADPRPGPAKSSQDSGPGPSTYQHLHIPVKMMEDFLRLASENTRKNLETCGVLAGSLKNRVFHITTLIIPKQESTSDSCSTLNEEEIFSSGQLITLSFRLDTYTPITNLFHVIRGPAHPLLIPDNVTGGNCNCHGSYRYNKSTWHISSIRSRGCVCNS 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03356 468 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 331 400 IPR000555 GO:0005515|GO:0008233|GO:0008237
Arst1g03356 468 Pfam USP8 dimerisation domain 4 93 IPR015063 -
Arst1g03356 468 FunFam AMSH-like ubiquitin thioesterase 3 1 115 - -
Arst1g03356 468 MobiDBLite consensus disorder prediction 295 333 - -
Arst1g03356 468 Gene3D Cytidine Deaminase, domain 2 319 405 - -
Arst1g03356 468 PANTHER AMSH-LIKE PROTEASE 3 399 - -
Arst1g03356 468 Gene3D - 3 113 - -
Arst1g03356 468 MobiDBLite consensus disorder prediction 295 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03356 Arst-Chr1 94667653 94672981 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03356 K11866 - gmx:100812784 628.632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g03356 1 94667653 94672981 Arst1g03356 1 94667653 94672981 ECH