Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03310 ATGGCTGACCTGAATAATTTCGAGCGCTTCGACGTCGTTTCAGACCATTCAGACCACCACTTTTCCCAACCAACTGCTAACACTACCAAGAAACAGAAACAGAACCGCAACCCGGAACCAACCAACCACGCTGCCCGAAACTGTTTTACAAACACGGGCAGCAAAGTGTACAAGAACATAATGCGAGAATGGAAGATCCTCGCTAACGGCCTGCCCGACTCCATCTACGTCCGCGTCTACGAGAGCCGCATCGATCTCATGAGGGCAGCAATCGTCGGCGCCGCCGGTACACCCTACCACAATGGACTCTTCTTCTTCGATATTGCTTTCCCGCCAAATTACCCGTCCCAACCTCCCAAGGTTCACTACCTCTCTTGCGGGTTCAAACTCAACCCGAACCTTTACCATAACGGCGAAGTGTGCCTCAGCCTCATCAACACCTGGATCGGTAAAAAGAGCGAGAAGTGGGACCCATGCGGTTCAACCGTTTTGCAGCTCCTCGTTTCTCTCCAAGGCCTCGTCCTAAACGACAAGCCGTTTTTCAACGAGGCCGGATCCGAAATCTTCGGACGCGCCTTCTTTGAGAAGCAGGCGCGTTCTTATAACTATTCCGTTTTCTTACTTAGCTGTAGGACTATGCTGTTTTGGCTCCAACGACCTCCGCGGAACTTCGAGGAATTCGTTCACGCGCACTTTCGTGGCAGCGCGTGTCGGATTCTGCGGGCGTGCCATGAGTACGTGAATGGGCGCGTGAGGGTTGGGTGGTACGGTGTGAGCGACGTTGGGGAGAACGGTGACTCTTCCCATCGGTCGCGTGCGAAGGTCCCGGAGGAATTCAAGGCATCGATGGGGAAGTTGTATCTTCGGATGGTTGTGGCGTTTCAACTGAATGGTTCTTCGTTGTGTTCGGAGCTTTTGGAATTAGAGAACAGTGATAAAAATGGTGGTTCGTCGAAGAATAAGGGGCATGGTGACAGAAAGTATGGGAAGATTGTCAGGAAGGTGTTGGGGAAGTTTAGGAAGTTTTATGCTTTGAAGAAGGATCAAAGTAGAAGAGTCGACGTGTCAAAGTGA 1074 0.5149 MADLNNFERFDVVSDHSDHHFSQPTANTTKKQKQNRNPEPTNHAARNCFTNTGSKVYKNIMREWKILANGLPDSIYVRVYESRIDLMRAAIVGAAGTPYHNGLFFFDIAFPPNYPSQPPKVHYLSCGFKLNPNLYHNGEVCLSLINTWIGKKSEKWDPCGSTVLQLLVSLQGLVLNDKPFFNEAGSEIFGRAFFEKQARSYNYSVFLLSCRTMLFWLQRPPRNFEEFVHAHFRGSACRILRACHEYVNGRVRVGWYGVSDVGENGDSSHRSRAKVPEEFKASMGKLYLRMVVAFQLNGSSLCSELLELENSDKNGGSSKNKGHGDRKYGKIVRKVLGKFRKFYALKKDQSRRVDVSK 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03310 357 PANTHER (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME 4 299 - -
Arst1g03310 357 Pfam Ubiquitin-conjugating enzyme 60 184 IPR000608 -
Arst1g03310 357 CDD UBCc 57 201 IPR000608 -
Arst1g03310 357 MobiDBLite consensus disorder prediction 16 46 - -
Arst1g03310 357 MobiDBLite consensus disorder prediction 19 46 - -
Arst1g03310 357 SMART ubc_7 58 214 - -
Arst1g03310 357 SUPERFAMILY UBC-like 47 221 IPR016135 -
Arst1g03310 357 Gene3D Ubiquitin Conjugating Enzyme 1 290 IPR016135 -
Arst1g03310 357 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 55 214 IPR000608 -
Arst1g03310 357 FunFam Putative ubiquitin-conjugating enzyme E2 38 1 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03310 Arst-Chr1 94319301 94321666 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g03310 7 305 Miscellaneous Gene Families AT2G33770 45.333 1.61e-70 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03310 K10581 - zju:107418976 344.739
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g03310 1 94319301 94321666 Arst1g03310 1 94319301 94321666 ECH