Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g02748 ATGGAGAGTTTGGTGATGAGTGGGAAGAAGCTTTGTGTGATGGTGTTATGTTTGTACTGGGTTCATGCAGTGACAGCTTCTGTTACATATGATCACAAAGCAATTGTTGTTAATGGGCAGAGAAAGATTCTGTTTTCTGGTTCTATACACTACCCCAGAAGCACACCTCAGATGTGGCCAGAGCTTATTCAAAAAGCTAAAGAGGGAGGGGTGGATGTTATTCAAACCTATGTGTTTTGGAATGGACATGAACCTTCTCCAGGGAAATATTATTTCGAGGATAGGTACGACTTAGTTAAGTTCATCAAGGTAGTGCAGCAAGCTGGACTTTATGTTAATCTCCGAATTGGTCCCTATGTATGTTCTGAATGGAACTTTGGGGGTTTTCCTGTTTGGCTAAAGTTTGTTCCAGGCATTGCTTTCAGAACAGATAATGAGCCTTTCAAGGCAGCAATGCAGAAGTTCACTGAGAAGATTGTGAGTATGATGAAGGCTGAGAATCTGTTTGAGACACAGGGGGGTCCAATAATTCTGTCACAGATAGAGAATGAGCTTGGACCAGTGGAATGGGAAATTGGTGATCCTGCAAAAGCTTATGCAAAATGGGCAGCTAAAATGGCTGTAGGTCTAGACACTGGTGTCCCTTGGATTATGTGCAAGCAAGAAGATGCTCCTGACCCTGTTATTGACACATGCAATGGGTATTACTGTGAAAACTTCACTCCCAACAAGAACTACAAACCAAAAATGTGGACAGAAAACTGGACAGGCTGGTGCACTTATTTTGGTGGTGGAGTTAATATTAGACCAGCAGAAGACTTGGCATTCTCAGTTGCTAGGTTCATACAAAATGGTGGTTCATTTGTTAACTATTATATGTATCACGGAGGAACTAACTTCGAGCGAACATCTGGTGGCCCCTTCATTACCACTAGCTATGACTATGATGCTCCAATTGATGAATATGGACTTCTAAATGAACCAAAATGGGGACATTTGAGAGATTTGCACAAAGCAATAAAGCTGTGTGAACCAGCTTTGATATCTGTAGATCCAAAGGTGACATCACTTGGAAATAACCTCGAGGCACATGTTTTCAAGACAGATTCTGGTGCTTGTGCTGCATTCCTTGCAAACTATGACACCAAATCTTCTGCAAAAGTTTCATTTGCAAATGAGCAATATGAACTACCACGTTGGTCCATAAGCATTCTTCCTGACTGCAAAACTGAAGTTTTCAACACTGCAAGGATTGGTGCTCAAAGCTCCCAGAAGAAGATGACTGTTGTAAGGAATGCATTTGATTGGGAGTCATACATTGAAGAACCTGCGTCGTCCAGCGAAGAGGATTCCATCACAGCGAATGCGCTTTGGGAGCAGATCAACATCACTAGAGATTCTACAGATTATTTGTGGTACATGACAGATGTCAATATTGATCCTAATGAAGGTTTTATTAAGAGTGGAAAATGGCCTCTTCTTACAGTAATGTCAGCAGGCCATGCTTTACTAGTTTTCATTAATGGCCAACATTCAGGAACTTCTTACGCCGGAGCCGACTTTCCTAAACTAACATTTAATCAAACTGTTAATGTAAGGGCTGGCAACAACAAGATTTCTTTACTTAGTATTGCCATCGGCCTCCCGCATGTTGGCATACACTTTGAGACATGGAATGTTGGGGTGTTAGGCCCTGTGACACTTGAGGGTGTAAATGAAGGGACCAGAGATTTGTCTCACCAGAAATGGTCTTACAAGGTTGGTCTGAAAGGTGAAGACTTAGGCCTTCAAACCGTGAGTGGGAGCGGCTCTGTTGAATGGGCACAAGGATCCTTATTGGCTAAGAAACAACCTTTGACATGGTACAAGACAAATTTTAACAAACCAGAAGGAAATGATCCATTGGCTCTAGACATGATCAGCATGGGAAAAGGTCAAGTATGGATAAATGGCCGAAGCATCGGCCGCCATTGGCCAGGATACACAGCACACGGAATTTGTTGGGATTGCGACTATGCCGGATCTTACACTGACAAGAAATGCAAAAAAAACTGTGGAGAACCTAGCCAGAGATGGTACCATGTTCCGAGGTCATGGCTGAGGCTGAGTGGGAACTATATGGTTGTGTTTGAAGAATGGGGAGGTGACCCTACTAGGATTTCTTTGGTGAAAAGAACAACAGATAGTGTGTGTGCTGATATATATGAAGATCAACCAACTCTGAAGAACAGGGAGAAGCTGGATTCTGGAAATGTTATTAGGCCAAAAGCACATTTGTGGTGTCCTCCAGGACAAAAGATGTCACAGATTAAGTTTGCTAGCTATGGTTTGCCACATGGAAGTTGTGGAAACTATAGACAAGGAGATTGTCATGCTCACAAATCATATGACGCTCCTCAAAGGAACTGCATTGGCAAACAATCATGCATGGTAACCGTTGCTTCTGAAGTTTTTGGGGGAGACCCATGTCCAGGAATTGCTAAGAAGCTCTCAGTTGAGGCCATATGCAGATAG 2514 0.4272 MESLVMSGKKLCVMVLCLYWVHAVTASVTYDHKAIVVNGQRKILFSGSIHYPRSTPQMWPELIQKAKEGGVDVIQTYVFWNGHEPSPGKYYFEDRYDLVKFIKVVQQAGLYVNLRIGPYVCSEWNFGGFPVWLKFVPGIAFRTDNEPFKAAMQKFTEKIVSMMKAENLFETQGGPIILSQIENELGPVEWEIGDPAKAYAKWAAKMAVGLDTGVPWIMCKQEDAPDPVIDTCNGYYCENFTPNKNYKPKMWTENWTGWCTYFGGGVNIRPAEDLAFSVARFIQNGGSFVNYYMYHGGTNFERTSGGPFITTSYDYDAPIDEYGLLNEPKWGHLRDLHKAIKLCEPALISVDPKVTSLGNNLEAHVFKTDSGACAAFLANYDTKSSAKVSFANEQYELPRWSISILPDCKTEVFNTARIGAQSSQKKMTVVRNAFDWESYIEEPASSSEEDSITANALWEQINITRDSTDYLWYMTDVNIDPNEGFIKSGKWPLLTVMSAGHALLVFINGQHSGTSYAGADFPKLTFNQTVNVRAGNNKISLLSIAIGLPHVGIHFETWNVGVLGPVTLEGVNEGTRDLSHQKWSYKVGLKGEDLGLQTVSGSGSVEWAQGSLLAKKQPLTWYKTNFNKPEGNDPLALDMISMGKGQVWINGRSIGRHWPGYTAHGICWDCDYAGSYTDKKCKKNCGEPSQRWYHVPRSWLRLSGNYMVVFEEWGGDPTRISLVKRTTDSVCADIYEDQPTLKNREKLDSGNVIRPKAHLWCPPGQKMSQIKFASYGLPHGSCGNYRQGDCHAHKSYDAPQRNCIGKQSCMVTVASEVFGGDPCPGIAKKLSVEAICR 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g02748 837 SUPERFAMILY (Trans)glycosidases 27 344 IPR017853 -
Arst1g02748 837 CDD Gal_Rha_Lectin_BGal 751 836 - -
Arst1g02748 837 Pfam Galactose binding lectin domain 759 836 IPR000922 GO:0030246
Arst1g02748 837 SUPERFAMILY Galactose-binding domain-like 582 741 IPR008979 -
Arst1g02748 837 ProSiteProfiles SUEL-type lectin domain profile. 751 837 IPR000922 GO:0030246
Arst1g02748 837 Gene3D Glycosidases 21 343 - -
Arst1g02748 837 PANTHER BETA-GALACTOSIDASE RELATED 22 742 IPR001944 GO:0004553|GO:0005975
Arst1g02748 837 FunFam Beta-galactosidase 590 731 - -
Arst1g02748 837 FunFam Beta-galactosidase 292 420 - -
Arst1g02748 837 Gene3D - 753 837 IPR043159 -
Arst1g02748 837 Pfam Glycosyl hydrolases family 35 35 339 IPR031330 -
Arst1g02748 837 FunFam Beta-galactosidase 746 837 - -
Arst1g02748 837 Gene3D - 596 731 - -
Arst1g02748 837 SUPERFAMILY Galactose-binding domain-like 402 572 IPR008979 -
Arst1g02748 837 PRINTS Glycosyl hydrolase family 35 signature 307 323 IPR001944 GO:0004553|GO:0005975
Arst1g02748 837 PRINTS Glycosyl hydrolase family 35 signature 114 133 IPR001944 GO:0004553|GO:0005975
Arst1g02748 837 PRINTS Glycosyl hydrolase family 35 signature 644 660 IPR001944 GO:0004553|GO:0005975
Arst1g02748 837 PRINTS Glycosyl hydrolase family 35 signature 171 186 IPR001944 GO:0004553|GO:0005975
Arst1g02748 837 PRINTS Glycosyl hydrolase family 35 signature 38 55 IPR001944 GO:0004553|GO:0005975
Arst1g02748 837 PRINTS Glycosyl hydrolase family 35 signature 250 265 IPR001944 GO:0004553|GO:0005975
Arst1g02748 837 PRINTS Glycosyl hydrolase family 35 signature 59 77 IPR001944 GO:0004553|GO:0005975
Arst1g02748 837 PRINTS Glycosyl hydrolase family 35 signature 287 302 IPR001944 GO:0004553|GO:0005975
Arst1g02748 837 PRINTS Glycosyl hydrolase family 35 signature 617 631 IPR001944 GO:0004553|GO:0005975
Arst1g02748 837 FunFam Beta-galactosidase 23 343 - -
Arst1g02748 837 FunFam Beta-galactosidase 445 582 - -
Arst1g02748 837 Pfam Beta-sandwich domain in beta galactosidase 347 418 IPR041392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g02748 Arst-Chr1 89352269 89357468 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g02748 5 836 Glycoside Hydrolase AT3G13750 67.742 0.0 1204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g02748 - - gmx:106795462 1456.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g02748 1 89352269 89357468 Arst1g02748 1 89352269 89357468 ECH
Arst1g02748 1 89352269 89357468 Arst3g02691 3 39836677 39842066 PCT