Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g02726 ATGGCGAGGATGCTTCGCAACGCTTCCATCATCAAGCGCACTCTGTTCCTCCCTCAGGGGTTTAAACTAGGAGTATTGGGCACTTCTCAGGCTCTAAGCTTTTCGTCTAAAGGTAGAAGGCGCTCTAAATCTGATGGAAGTAGTGACTCTGGTGAAGAGAGCATGTCTAAGAAAGAGTTGGCCCTTCAGCAAGCTCTAGATCAGATCACTTCTTCATTTGGAAAGGGATCTATCATGTGGCTTGGCCGCTCTGTCTCACCAAGACATGTACCTGTAGTCTCAAGTGGTTCTTTTGCTCTTGATATAGCACTGGGAATTGGTGGACTTCCAAAGGGACGTGTTGTGGAAATATATGGTCCAGAGGCTTCGGGGAAAACAACTCTTGCTTTACATGTGATTTCAGAGGCACAGAAGCAAGGAGGCTACTGTGTATTTGTTGATGCTGAGCATGCTCTTGATAAGGCACTTGCAGAATCCATTGGTGTGAATACTGAGAACTTGTTGCTTTCACAACCAGATTGTGGTGAACAAGCACTTAGTCTTGTGGATACCTTAATCCGTAGTGGTTCAGTTGACGTAATTGTTGTTGACAGTGTGGCTGCTCTTGTTCCTAAAGGGGAGCTTGATGGTGAAATGGGGGATGCACACATGGCAATGCAGGCTAGGTTGATGAGCCAGGCCCTTCGGAAATTAAGCCACTCCTTGTCAGTTTCTCAATGTATATTGATTTTTATAAACCAGGTAAGGTCAAAGCTTTCTACTTTTGGTGGATTCGGTGGGCCCCAGGAAGTTACTTGTGGTGGCAATGCATTGAAATTCTATGCATCTGTGCGGCTAAATATTAGAAGAATAGGATTTGTGAAGAAAGGGGAAGAGATTTTGGGAAGCCAGGTACTTGTCAAGGTTGTAAAGAACAAGCTTGCCCCTCCATTTAAAACTGCTGAGTTTGAGCTTCAATTTGGCAAGGGTATAAATAGAGAATGTGAGATCATAGACTTGAGTGTAAAACACAAAATCATCCTAAAGGCCGGTGCTATGTATTACTTCAATGATAAGAATTTCCGTGGTAGGGATGCTTTTAAGAGTTTCCTGGCCGAGAATCATAGTGCATTTGAAGAACTTCAAATGAAACTCAGGGAGAAGCTTCTTGATGATACTGAGGTGGAAAAGGTACAAGATTCAGATGTGACTAGTGATGTCAAAGAAGAAATTACAACAACACTCGAGTCTACCGATGAAGAATCCTCAGCTGCTGTCGAAGCTTGA 1266 0.436 MARMLRNASIIKRTLFLPQGFKLGVLGTSQALSFSSKGRRRSKSDGSSDSGEESMSKKELALQQALDQITSSFGKGSIMWLGRSVSPRHVPVVSSGSFALDIALGIGGLPKGRVVEIYGPEASGKTTLALHVISEAQKQGGYCVFVDAEHALDKALAESIGVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVIVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSVSQCILIFINQVRSKLSTFGGFGGPQEVTCGGNALKFYASVRLNIRRIGFVKKGEEILGSQVLVKVVKNKLAPPFKTAEFELQFGKGINRECEIIDLSVKHKIILKAGAMYYFNDKNFRGRDAFKSFLAENHSAFEELQMKLREKLLDDTEVEKVQDSDVTSDVKEEITTTLESTDEESSAAVEA 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g02726 421 ProSiteProfiles RecA family profile 2. 258 329 IPR020587 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Arst1g02726 421 MobiDBLite consensus disorder prediction 393 408 - -
Arst1g02726 421 ProSiteProfiles RecA family profile 1. 89 248 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Arst1g02726 421 Hamap Protein RecA [recA]. 58 385 IPR013765 GO:0003697|GO:0005524|GO:0006281
Arst1g02726 421 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 61 324 IPR027417 -
Arst1g02726 421 SMART AAA_5 111 285 IPR003593 GO:0016887
Arst1g02726 421 CDD RecA 89 326 IPR013765 GO:0003697|GO:0005524|GO:0006281
Arst1g02726 421 Gene3D - 88 393 IPR027417 -
Arst1g02726 421 MobiDBLite consensus disorder prediction 38 56 - -
Arst1g02726 421 ProSitePatterns recA signature. 270 278 IPR020584 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Arst1g02726 421 NCBIfam recombinase RecA 58 380 IPR013765 GO:0003697|GO:0005524|GO:0006281
Arst1g02726 421 SUPERFAMILY RecA protein, C-terminal domain 326 381 IPR023400 -
Arst1g02726 421 PRINTS RecA protein signature 267 295 IPR013765 GO:0003697|GO:0005524|GO:0006281
Arst1g02726 421 PRINTS RecA protein signature 219 248 IPR013765 GO:0003697|GO:0005524|GO:0006281
Arst1g02726 421 PRINTS RecA protein signature 147 176 IPR013765 GO:0003697|GO:0005524|GO:0006281
Arst1g02726 421 PRINTS RecA protein signature 181 210 IPR013765 GO:0003697|GO:0005524|GO:0006281
Arst1g02726 421 PRINTS RecA protein signature 300 329 IPR013765 GO:0003697|GO:0005524|GO:0006281
Arst1g02726 421 PRINTS RecA protein signature 353 370 IPR013765 GO:0003697|GO:0005524|GO:0006281
Arst1g02726 421 FunFam Recombinase RecA 87 386 - -
Arst1g02726 421 Pfam recA bacterial DNA recombination protein 61 325 IPR013765 GO:0003697|GO:0005524|GO:0006281
Arst1g02726 421 MobiDBLite consensus disorder prediction 36 57 - -
Arst1g02726 421 PANTHER RECA 34 393 IPR013765 GO:0003697|GO:0005524|GO:0006281
Arst1g02726 421 MobiDBLite consensus disorder prediction 393 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g02726 Arst-Chr1 89075944 89080730 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g02726 K03553 - gmx:100781271 628.632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g02726 1 89075944 89080730 Arst1g02726 1 89075944 89080730 ECH
Arst1g02726 1 89075944 89080730 Arst3g02731 3 41411868 41416832 PCT