Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g02548 ATGGATCCTAATAATGCTGATAATACCAATGTGGCAAATCCAAATGGGGATGAGCAACAAAGAAGAGTGCTTGGCTCTTATTCTGCTCCTACTGCAGATCTTTATGGAAAAAGCATTGTGGTGCCTCCTATAGCTGCGAACAACTTTGGTTTGAAGCCACAACTGGTCACACTGACAAATGGAGTGAACCTAGAGGTCAATTACATGGGGAGTGCTACTAGAAATCCCAACAATGATCCCTATTCTAAGACCTACAATCAGGGGTGGAGAAATCACCCAAATTTTAGGTGGAGAGAGCAACCTCAGAGGCCACAAAATTTTAATCATAATTCTCAGGGTGGTTTTCATCAGAATAATTTTAATAACCACCATTTTCAGTCATCTCAGCAAGTAACTTCTCAGCCCCAACAGAATAATGATTTGGAAGCAATAAAGATAAGTTTTAGACAGGAAACCAGACCATCAATCAATAACTTAGAGATTCAGATGGGTCAATTAGCCACAAAAGTTAATGAAATTGATCAAATGACCACTAATAGCCTTCCTGGTAATACAGTGCCATGTGAATCACACCATAACCAAACCTCTTTATCCTCACAACCCAGCTTGGCTTCAGTACCCTCTCTTAACAAGAACTATCATTATTCTTGTTCTAATTATTCAACCGCCTCATACAACTGCATCGCAACCCTAAAAGGACACAACTACTACACATCCTCCTTAACCCTCTCCGCTAAATTCCTCTACAGTGGCTCCTCCGACAGAGAAATTAGGTCATGGTCCAAACAATCATTATTAACTACCACTAATAATATAGTCCTTGCTGGGAAAGGTGCAGTCAAGTCTCTAGTTGTTCACTCAGACAAGCTCTTTAGTGCTCACCAAGATAACAAAATTAGGGTTTGGAAGATCACCAACAATATCAACAACCACCACGACCATGAGCAGAAGTACACGCGTTTGGCCACGCTTCCAACGCTCAGCGACCGCGTCTCCAAGATATTACTCCCCAAAAACCACGTTAGAATCCGGAGGCACAAAAAGTCCACGTGGGTTCACCACGTGGATGCAGTGTCTTGTCTTGCCCTATCCCATGACGGAGCCTTGTTATACTCTGCCTCGTGGGACAGGACGATCAAGATTTGGCGAACCAGAGACTTTGCGTGTTTGGAATCAGTGATAAATGCACACGATGATGCCATCAACGCAGTTGCAGTTTCCAACGATGGACGCGTCTACACAGGATCGGCGGACAAAAGAATCAAGGTTTGGAAGAAGAAAGGCGGCGGCCAAGGAGTAGTGGGAGAGAAAAGCAAAAGCAAAAACAAACACTACCTTGTGGACACGTTGGAGAAACACAAGTCTGGGATCAACGCTTTGGCGCTTAACGGCGACGGTTCGTTACTATATTCCGGGGCATGTGATAGATCAATACTGTTATGGGCGAAGAAGGAAGAAGACAAAGAAGGAGAAGGTGGTGATGGAAAAATGGTGGTGGTGGGTGCGCTTAGGGGGCATGGTAAGTCTATACTTTGCTTAGTGGTGGTGATGGATTTTGTTGTGAGTGGTTCAGAGGACAAAACGATTCGTGTTTGGAGGGGTTTTGGCGGGAGAGAGTATACTTGTGTGGCGGTTTTGGAAGGGCATAGAGGACCAATTAAGAGCCTAACCGCCATGGTTGATCATAACCATGATGATCCTTCCCAAGCATCGATGGTTGTCTATAGTGGCAGTTTGGACTGTGACATTAAGGTTTGGAAGGTTTTTGTTCCTCTTCCCTGA 1782 0.4433 MDPNNADNTNVANPNGDEQQRRVLGSYSAPTADLYGKSIVVPPIAANNFGLKPQLVTLTNGVNLEVNYMGSATRNPNNDPYSKTYNQGWRNHPNFRWREQPQRPQNFNHNSQGGFHQNNFNNHHFQSSQQVTSQPQQNNDLEAIKISFRQETRPSINNLEIQMGQLATKVNEIDQMTTNSLPGNTVPCESHHNQTSLSSQPSLASVPSLNKNYHYSCSNYSTASYNCIATLKGHNYYTSSLTLSAKFLYSGSSDREIRSWSKQSLLTTTNNIVLAGKGAVKSLVVHSDKLFSAHQDNKIRVWKITNNINNHHDHEQKYTRLATLPTLSDRVSKILLPKNHVRIRRHKKSTWVHHVDAVSCLALSHDGALLYSASWDRTIKIWRTRDFACLESVINAHDDAINAVAVSNDGRVYTGSADKRIKVWKKKGGGQGVVGEKSKSKNKHYLVDTLEKHKSGINALALNGDGSLLYSGACDRSILLWAKKEEDKEGEGGDGKMVVVGALRGHGKSILCLVVVMDFVVSGSEDKTIRVWRGFGGREYTCVAVLEGHRGPIKSLTAMVDHNHDDPSQASMVVYSGSLDCDIKVWKVFVPLP 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g02548 593 Gene3D - 340 437 IPR015943 GO:0005515
Arst1g02548 593 FunFam BnaA09g28200D protein 341 428 - -
Arst1g02548 593 ProSiteProfiles Trp-Asp (WD) repeats profile. 394 425 IPR001680 GO:0005515
Arst1g02548 593 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 351 382 - -
Arst1g02548 593 PANTHER F-BOX AND WD40 DOMAIN PROTEIN 157 588 IPR045182 -
Arst1g02548 593 PRINTS G protein beta WD-40 repeat signature 520 534 IPR020472 -
Arst1g02548 593 PRINTS G protein beta WD-40 repeat signature 412 426 IPR020472 -
Arst1g02548 593 PRINTS G protein beta WD-40 repeat signature 370 384 IPR020472 -
Arst1g02548 593 SMART WD40_4 539 587 IPR001680 GO:0005515
Arst1g02548 593 SMART WD40_4 387 425 IPR001680 GO:0005515
Arst1g02548 593 SMART WD40_4 496 533 IPR001680 GO:0005515
Arst1g02548 593 SMART WD40_4 267 303 IPR001680 GO:0005515
Arst1g02548 593 SMART WD40_4 224 261 IPR001680 GO:0005515
Arst1g02548 593 SMART WD40_4 344 383 IPR001680 GO:0005515
Arst1g02548 593 SMART WD40_4 443 482 IPR001680 GO:0005515
Arst1g02548 593 ProSiteProfiles Trp-Asp (WD) repeats profile. 231 261 IPR001680 GO:0005515
Arst1g02548 593 Coils Coil 156 176 - -
Arst1g02548 593 ProSiteProfiles Trp-Asp (WD) repeats profile. 450 481 IPR001680 GO:0005515
Arst1g02548 593 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 450 481 - -
Arst1g02548 593 ProSiteProfiles Trp-Asp (WD) repeats profile. 351 392 IPR001680 GO:0005515
Arst1g02548 593 MobiDBLite consensus disorder prediction 1 21 - -
Arst1g02548 593 Pfam WD domain, G-beta repeat 394 425 IPR001680 GO:0005515
Arst1g02548 593 Pfam WD domain, G-beta repeat 447 481 IPR001680 GO:0005515
Arst1g02548 593 Pfam WD domain, G-beta repeat 541 587 IPR001680 GO:0005515
Arst1g02548 593 Pfam WD domain, G-beta repeat 501 532 IPR001680 GO:0005515
Arst1g02548 593 Pfam WD domain, G-beta repeat 226 261 IPR001680 GO:0005515
Arst1g02548 593 Pfam WD domain, G-beta repeat 351 382 IPR001680 GO:0005515
Arst1g02548 593 Gene3D - 182 339 IPR015943 GO:0005515
Arst1g02548 593 MobiDBLite consensus disorder prediction 102 134 - -
Arst1g02548 593 CDD WD40 227 587 - -
Arst1g02548 593 ProSiteProfiles Trp-Asp (WD) repeats profile. 503 532 IPR001680 GO:0005515
Arst1g02548 593 SUPERFAMILY WD40 repeat-like 224 588 IPR036322 GO:0005515
Arst1g02548 593 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 503 532 - -
Arst1g02548 593 Gene3D - 438 590 IPR015943 GO:0005515
Arst1g02548 593 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 394 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g02548 Arst-Chr1 84705869 84725363 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g02548 390 587 Acyl Lipid Metabolism Gene Families AT3G18860 25.490 2.23e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g02548 - - adu:107472498 1153.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g02548 1 84705869 84725363 Arst1g02548 1 84705869 84725363 ECH