Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g02497 ATGGAGACCCTGACGGCCACATCCGACACGGGCACGACCGTGCGTGTCTCCAACATCCCCATATCCGCCACCGCCACCGACCTCGTCCACTTCCTCCAAGCCACACTGGGACCCTCCTCCGTCTTCGCCCTTGAGATCTTCACCGATCAGAACAACGCCACCTGGAACTCCCGCTCCTTCGGCCGCGTTCAGTTCGAGACACCGGACGCCAAAACCAAGGCCCTCTCCCTCTCCCACCACAACACCCTCGTCTTCAAATCCCACTTCCTCCACCTTTCCCACGCCCCCGACGATGTCGTCTTCCGCCCCTCTCTCCCCTCCCACCGCCTCGAAAACGGCACCCTCTATGCCGGCTTCATGGTCCGCGACGACCGCATGAGTGTGCTGCACACCTGGGAACGTGTCAGGGGCTGGCCCATGCCCGAGAGGAGGAAGATCGAGTTCTGGGTCCCACATGATGGACAGTGCTACAAGCTCGAGATTTGGTTCGAGGATATTCTGGAGGCCAATGGGTACTGTTTGGGTGGTGGTGACAAACTCAATGCCCTCCTCTTGAAGCTGAAATATGCACCAAAGATTTATCAGAAAAAATTTGGGTCAAATGTGTCGTCGAAGTTTAATGCTGCTAATGGTAGGTACCATTTCTGCAAGGAGGATTATGATTTTACTTGGGTGCGTACGACAGACTTCTCAGCTATGAAGGCACTTGGACATTCTACATCGTTTTGTTGGGAGATTGAGGAAGGACCATTCAATCAGGATATTTTTTGTAGTTTCCCGCTCTACAGAGAAATTCTGAAAGATCTAACTCTAGAGGAGGGGGAAGAGTATTGTTCTCCGGCAGAAATAGTTCCACTTGTAAACTGTCTTTCTACAGATACTAAGATACCGTATGAGACCCTTTTCCAATTGAATTCCCTCATTCATACCCAGAAAATCAGTCTTGCATCAGTAGATAGTGATTTCATTGACTTGCTAGGAAGTTTAGATGAAGAAACCAAAGCCCTGATTTTTCAGAAATTGCACAAGCTGAATTCCACTTGTTATGAACCTCAAAAATTTGTGAATACTCAATTACATGTGCTAAGTAGTAAGGGTAGAGGTCCTCATCCATCATCGCAGAAAAGGCTGATGGAGAATAACATAATGAGCTGTCATAGAGCCTTGATTACCCCAACAAAGATTTATTGTCTTGGTCCTGAGCTTGAAACCTCAAATCATGTGGTAAAGCATTTTTCTCAATTTGCTTCAGATTTCATGAGGATCACTTTTGTTGATGAGAACTGGGGTAAGCTTCCAGTTAATGCTGTATCAGCTAGTTTGCAAAAGGGAATCTTTTCAGAACCTTTTAGAACTAAAATATATGAGCGGATATTGACTATTCTTCGAGATGGGATTGTAATTGGTTTGAAAAAATTTGAGTTTCTGGCCTTCTCTGCGAGTCAACTCCGATCAAATTCAGTTTGGGTTTTTGCTTCAAGTGACAAGTTGAAAGCAGCAGATATTAGAGAATGGATGGGATGCTTCAACAATATTCGCAGCGTTTCTAAATGTGCAGCGAGGATGGGTCAGTTGTTCAGTTCATCAATGCAAACTTATGAAGTGCCCATTCAAGATGTGGAAATAATTCAAGATATTGAAGTTGAGAGTGATGGTATAAAATACTGTTTCTCAGATGGTATTGGGAAAATTTCCCTCTCTTTTGCAAAAAAGGTTGCTGAAAAGCTAAAGTTGGATAAGAATCAGATTCCATCAGCATTTCAAATTCGGTATGGTGGATACAAAGGTGTTCTTGCTGTTGATCGCCATTCCTTTAGGAAGTTATCGCTGCGTGGCAGTATGCTTAAATTTGAATCGAAAAACAAAATGCTTTGTGTCACTAATTGGAGTGATTCAATGCCTTGCTTTCTCAACCGAGAGGTTATATCTTTGCTGTCTACTTTAGGAGTAAAAGATGAGGCGTTTTTGGCAATGCAGCAGGAACAAGTGCATTTGCTAGGAAGGATGTTGACTGACAGTGATGCGGCTTTGGAAGTTTTGGAAACCCTAAGTGGAGCTGATTCTAAAAGCATTCTAGTGAAGATGTTGCATGGATTTTATAAGCCGAACAGTGAGCCTTACCTGGCGATGATGCTCAGAGCAAATTATGCATACCAGTTATCTGATTTGAGAACTAGATGCCGAATATTTGTTCCCAAGGGTCGTATCTTGTTAGGTTGCTTGGATGAAACTGGTCAATTGGATTATGGTCAAGTATTTGTCCGCATAACTGTGCCCAAAGCTAAGCAACAGTTTGAAGATGAAAGCTTGAGGAAAGTGGATGGTGATGACAGCACTTGTATACTAGTGGGGAAGGTGGTAGTAACAAAAAATCCTTGTCTTCACCCTGGAGACATCAGAGTCCTTGATGCTGTCTACAATGAAGAACTAGAGGAAATGGGTTTGAGGGATTGCCTTGTATTTCCACAAAAAGGTCGTAGGCCTCATCCAAATGAATGCTCTGGGGGTGACCTTGATGGAGATTTATTTTTCTTAAGCTGGGAGAAAGATATGATCCCATCTCACACTGATTCTCCAATGGACTACACGGGGAGGAGGCCTCGTATAATGGACCACGATGTGACACTGGAGGAAATCCATAGGTTTTTTGTTGATTACATGATCAATGATACCTTGGGTGCTATCTCAACCGCTCATCTGGTTCACGCTGACCGTGAACCAGAAAAGGCCAGGAGTCACAAATGCCGGGAGTTGGCAGAACTTCATTCCATGGCTGTTGACTTTGCAAAGACTGGAGCACCTGCTGAAATGCCAAGAGTTCTGAAGCCAAGAGAGTATCCGGATTTCATGGAGAGGTTTGACAAGCCTATGTATATCTCCAACGGGGTACTAGGAAAACTCTACCGTGACATAACTGAGTTGAAATTGCAAGTAACATCAAGCTCTGCCTGGTCAGAGAAGCTTGCTGAGCAATACTATGATCACGAACTTGAAGTTGATGGTTTTGACGCCTACCTTGAAACCGCATCAAGTCACAAAGAAATGTATGCTCAGAAGATGACTAGTTTAATGAAATTCTATTGTGCAGAGACTGAAGATGAGCTGCTGACTGGAAACTTGATAAACCGCGCGTCATATTTGCAGCGTGATAACAGGAGATATGGAGATATGAAGGACCGGATCCTGATCTCGGTCAAGGATCTTCAGCGTGAAGCCAAAGAATGGTTTGAAACAAGCTGTGAACCCCGTGAATATCAACCTATGGCATCTGCATGGTATCATGTGACCTATCACCCAAAATATTACCAGGAAAACTCCAACTTTTTGAGTTTTCCATGGATAGTTGGTGATATTTTACTGCATATAAAGGCTGTATATAGTGGAGTTAACAAATAG 3396 0.4405 METLTATSDTGTTVRVSNIPISATATDLVHFLQATLGPSSVFALEIFTDQNNATWNSRSFGRVQFETPDAKTKALSLSHHNTLVFKSHFLHLSHAPDDVVFRPSLPSHRLENGTLYAGFMVRDDRMSVLHTWERVRGWPMPERRKIEFWVPHDGQCYKLEIWFEDILEANGYCLGGGDKLNALLLKLKYAPKIYQKKFGSNVSSKFNAANGRYHFCKEDYDFTWVRTTDFSAMKALGHSTSFCWEIEEGPFNQDIFCSFPLYREILKDLTLEEGEEYCSPAEIVPLVNCLSTDTKIPYETLFQLNSLIHTQKISLASVDSDFIDLLGSLDEETKALIFQKLHKLNSTCYEPQKFVNTQLHVLSSKGRGPHPSSQKRLMENNIMSCHRALITPTKIYCLGPELETSNHVVKHFSQFASDFMRITFVDENWGKLPVNAVSASLQKGIFSEPFRTKIYERILTILRDGIVIGLKKFEFLAFSASQLRSNSVWVFASSDKLKAADIREWMGCFNNIRSVSKCAARMGQLFSSSMQTYEVPIQDVEIIQDIEVESDGIKYCFSDGIGKISLSFAKKVAEKLKLDKNQIPSAFQIRYGGYKGVLAVDRHSFRKLSLRGSMLKFESKNKMLCVTNWSDSMPCFLNREVISLLSTLGVKDEAFLAMQQEQVHLLGRMLTDSDAALEVLETLSGADSKSILVKMLHGFYKPNSEPYLAMMLRANYAYQLSDLRTRCRIFVPKGRILLGCLDETGQLDYGQVFVRITVPKAKQQFEDESLRKVDGDDSTCILVGKVVVTKNPCLHPGDIRVLDAVYNEELEEMGLRDCLVFPQKGRRPHPNECSGGDLDGDLFFLSWEKDMIPSHTDSPMDYTGRRPRIMDHDVTLEEIHRFFVDYMINDTLGAISTAHLVHADREPEKARSHKCRELAELHSMAVDFAKTGAPAEMPRVLKPREYPDFMERFDKPMYISNGVLGKLYRDITELKLQVTSSSAWSEKLAEQYYDHELEVDGFDAYLETASSHKEMYAQKMTSLMKFYCAETEDELLTGNLINRASYLQRDNRRYGDMKDRILISVKDLQREAKEWFETSCEPREYQPMASAWYHVTYHPKYYQENSNFLSFPWIVGDILLHIKAVYSGVNK 1131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g02497 1131 Gene3D - 4 94 IPR012677 -
Arst1g02497 1131 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 12 97 IPR000504 GO:0003723
Arst1g02497 1131 SUPERFAMILY RNA-binding domain, RBD 8 98 IPR035979 GO:0003676
Arst1g02497 1131 PANTHER RNA-DEPENDENT RNA POLYMERASE 10 1123 IPR007855 GO:0003968
Arst1g02497 1131 PANTHER RNA-DEPENDENT RNA POLYMERASE 10 1123 IPR007855 GO:0003968
Arst1g02497 1131 CDD RRM_SF 14 83 - -
Arst1g02497 1131 Pfam RNA dependent RNA polymerase 390 971 IPR007855 GO:0003968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g02497 Arst-Chr1 81757332 81761784 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g02497 K11699 - gmx:100808274 1709.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g02497 1 81757332 81761784 Arst1g02497 1 81757332 81761784 ECH