Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Arst1g02303 | ATGGAGTCTACTCAAGTGATCAAGGTCAAGTATGGAGATACCCTCCGGCGATTCACTGCTGGCATCACTGATAATCACCTGGATTTTGACATGGCTGGTTTGAGGGCCAAGATACTTTCTCTTTTCAATTTAACTTCTGATGCAAACTTTGAGCTTAAGTATGTTGATGAAGATGGCGACTTGGTGACACTTGTGGATGATGATGATTTGCATGATGCAATGAAGCAGCGCCTGAAATTCTTGAGAATTGATGTGCATATCAGCAATGACAGTGGTGCTAAGTCATGTTCCAGCTTCACTTCCAGTGGAAGTGACACTACCTTAAAAAGTAGCGATCATGAAAATTCTTCCTCCACAGCAAGAGGTCCACGGCGGATTATACGAGTGAGATCTTCCAAAGCCAATAGTCAACCTGCTGAGTCTGAAAATGGAAAATTTGGGACAGAGCCGATGTCTGAGGCTCTTCAGAAGTTGGCAAAATCAAGAGTTACAACTGGGAATGCAACTTCTGCCAATGGCAGTCAACAGGTGGATACTGAAAATGCAAGTGGAGCTACACCTGTTGTCAAAGCCTCAGTGACTGGGAACCCAACTTCATCTGATGCCAATCAACAGGTAGAGGCTGAAAATGCATCTAGAGCTGTACCTCTTGTTATAGCTCATGATGCTTTGAATTCTGTCCCAGAGCCCCTGCGGGAATCTGTTTCCAAGTTAATTACTGAGTTGCTTACTTCAAGCCCGGTGATTGCTCAGGCTGTTGATTCAGCTTCCAAAACAGCAAATTTTTCGTTCAAAAAATGGCAGGCTATTGCTGCAGCTGCTTCAAGTTCAAAAAATGGTCTCCCTGGAAAATCTTCCTCTCCCAAGGCAAGAGATGCAGGTTCTACATCTGGGGTTGCAGCTTCCAATGCTAGCCAAACGGTGGAATCTGAAAATGTAGCTAAATCTGTAGCTATGGTTGTTACTCCAGATTCTCTGAAGTCTCTGCCAGAAAACCTGTGCGATGCTGTTTCTAAGTTTACAACCGACTTGCTGTCTTATGGACCAGTGGCTGCTAATATTGCAGATTCCATTTCCAAAATGGGAATTCCAAGTCCTTATTTCCAGGCTCATGTTTCAGCTGGTGTAAATTCACAGAATGGCATTCCAGGAGGATCTGTTCCTTCTGAAGCAAGGAGATCAGAGTCTGTCCAGGTGGATTCCACTTCTACTGCTGGGCAACAGGTGGGAGCTGGAAATCCAGATAAAGGTTTTGTGCCAGGAGTTGCCCCAGTTGATCTCAATATACTTCCCAGTGATCCCGGTGCATCTCACACCGCTGATATGAATGCTACACCAATTGCACCAGCAGTCCCTGATGGTGATGGCAAGAAGGGTAAAAAGTGTACTGATGTTAGTTCAAGTAGCAAGGATGAAAGTATGGGGGTATCTCCAATTAATGCTGCTCTTAATAACTTCCCAACCCAGATACCTCCAAATTATACTCCTTCCTATTATTATCCGTTTATGGGAGTGCATCCTGAATCATCATCCCAACTCAGAAGGCAATTTTTTCGCTCAATGAAAAAGAGCCCAAATTCCGCCGAGGCTAGTGGCATGTTCCACAAAGGAGTTCGCTGTGATGGTTGTGGTGTCTATCCCATTACTGGACCTCGCTTTAAATCCAAAGTGAAAGAAAATTATGATCTCTGCAGCATCTGCTTCATTAAAATGGGCAATGAGATGGATTATATCAAAATAGACCGTCCTGTGCATCATTCCCCACCATTCTCCTCGGGTGCATATGAACATCCATCTTGTTTTATGGGGCCACCAATGCCAAGACCTTTAGTGATGCAACCACCTCTGATGGGTTCCCCAACATCGCCACATGCTTTTAGACCAGAGGCTTTGTTCAGGGAGGTCACCAAACATGTAAAGCCAAAGCTGGATAGTCGATTTGTTTTGGACGTCAATGTGATAGATGGTACAATGATGGCTCCATCTACTACATTTACAAAAATCTGGCGGATGCGCAACAATGGCACTGTAGTGTGGCCCAAGGGGTCTCAACTAGTTTGGATTGGAGGAGATCACTTATCTGAGTCTCATTCAGTTTACTTAGAGGTTTGCTGAAACTCCCATGGTTTACTCTTTTATTCTTTTTTGAGATATTTATTTGCATGGCAGTGTTTTGAGTGCTCTCCTGGTCGTTACGTTTCATACTGGAGGATGGCATCTCCATCTGGACACAAATTTGGCCAGCGTGTTTGGGTACTCATTCAGGTTGATGCTTCCCTCAAGGATTCTTTTTATGATAGCTCTCAAGGTCTGAACTTGAATGTTCCTCTTGATGTTAGTGGCTCTGGAGGGCCCCAAACTATAGATATTAATGTTCAACCTCTTGAGGATGATGCATTTCTTCAAAACCTGAATCCTATTGCTCCCACCAAAGCTGTGAATCCAATGGCTGATAAACAACCAAGGCAGGAACTGGAAAATAGACTCCTCCCTGTTGATGCTACATTTGTTGGCCCCGTTGCATCCTCTCCTGCAATTTCTTCAGCTGCTGCTTATTGTGCCTCAGCCCCTGCAACTGCTGCAACATCTTCAGATGCTTCCTATCCCATTATTGATCTATCTGAAACAGCCCCAACTGCAACGTCTGATCAGCAATTCTCGGCTGTCGATACACAGTCAACATCCATGGGATTGGGAGGAAATGGTTCTGTCGAAGAGACACTCCTTAAAGAACTGGAGGAGATGGGTTTCAAGCAGGTTGACTTGAATAAAGAGATCTTGAGGATGAACGAGTACAATCTGGAGCAGTCTGTGGATGATCTCTGCGGTGTTTCTGAGTGGGACCCTATCCTTGAGGAGCTGCAAGAGATGGGATTCCGTGACAACGAGATGAACAAGAGGCTGCTCAAGAAGAATAATGGAAGCATCAAGCGCGTTGTTATGGATTTAATCAATGGAGGAGAATAG | 2967 | 0.4462 | MESTQVIKVKYGDTLRRFTAGITDNHLDFDMAGLRAKILSLFNLTSDANFELKYVDEDGDLVTLVDDDDLHDAMKQRLKFLRIDVHISNDSGAKSCSSFTSSGSDTTLKSSDHENSSSTARGPRRIIRVRSSKANSQPAESENGKFGTEPMSEALQKLAKSRVTTGNATSANGSQQVDTENASGATPVVKASVTGNPTSSDANQQVEAENASRAVPLVIAHDALNSVPEPLRESVSKLITELLTSSPVIAQAVDSASKTANFSFKKWQAIAAAASSSKNGLPGKSSSPKARDAGSTSGVAASNASQTVESENVAKSVAMVVTPDSLKSLPENLCDAVSKFTTDLLSYGPVAANIADSISKMGIPSPYFQAHVSAGVNSQNGIPGGSVPSEARRSESVQVDSTSTAGQQVGAGNPDKGFVPGVAPVDLNILPSDPGASHTADMNATPIAPAVPDGDGKKGKKCTDVSSSSKDESMGVSPINAALNNFPTQIPPNYTPSYYYPFMGVHPESSSQLRRQFFRSMKKSPNSAEASGMFHKGVRCDGCGVYPITGPRFKSKVKENYDLCSICFIKMGNEMDYIKIDRPVHHSPPFSSGAYEHPSCFMGPPMPRPLVMQPPLMGSPTSPHAFRPEALFREVTKHVKPKLDSRFVLDVNVIDGTMMAPSTTFTKIWRMRNNGTVVWPKGSQLVWIGGDHLSESHSVYLEVCXNSHGLLFYSFLRYLFAWQCFECSPGRYVSYWRMASPSGHKFGQRVWVLIQVDASLKDSFYDSSQGLNLNVPLDVSGSGGPQTIDINVQPLEDDAFLQNLNPIAPTKAVNPMADKQPRQELENRLLPVDATFVGPVASSPAISSAAAYCASAPATAATSSDASYPIIDLSETAPTATSDQQFSAVDTQSTSMGLGGNGSVEETLLKELEEMGFKQVDLNKEILRMNEYNLEQSVDDLCGVSEWDPILEELQEMGFRDNEMNKRLLKKNNGSIKRVVMDLINGGE | 988 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Arst1g02303 | 988 | Gene3D | - | 946 | 986 | - | - | |
| Arst1g02303 | 988 | Gene3D | Immunoglobulins | 637 | 708 | IPR013783 | - | |
| Arst1g02303 | 988 | Gene3D | Immunoglobulins | 725 | 760 | IPR013783 | - | |
| Arst1g02303 | 988 | Gene3D | - | 899 | 945 | - | - | |
| Arst1g02303 | 988 | ProSiteProfiles | Ubiquitin-associated domain (UBA) profile. | 937 | 986 | IPR015940 | - | |
| Arst1g02303 | 988 | SMART | PB1_new | 4 | 88 | IPR000270 | GO:0005515 | |
| Arst1g02303 | 988 | Pfam | Ig-like domain from next to BRCA1 gene | 652 | 698 | IPR032350 | - | |
| Arst1g02303 | 988 | Pfam | Ig-like domain from next to BRCA1 gene | 728 | 756 | IPR032350 | - | |
| Arst1g02303 | 988 | MobiDBLite | consensus disorder prediction | 94 | 122 | - | - | |
| Arst1g02303 | 988 | MobiDBLite | consensus disorder prediction | 879 | 902 | - | - | |
| Arst1g02303 | 988 | Gene3D | - | 527 | 588 | IPR043145 | - | |
| Arst1g02303 | 988 | PANTHER | OVARIAN CARCINOMA ANTIGEN CA125-RELATED | 1 | 985 | - | - | |
| Arst1g02303 | 988 | SUPERFAMILY | RING/U-box | 530 | 585 | - | - | |
| Arst1g02303 | 988 | CDD | UBA_NBR1 | 946 | 984 | - | - | |
| Arst1g02303 | 988 | MobiDBLite | consensus disorder prediction | 277 | 307 | - | - | |
| Arst1g02303 | 988 | Pfam | Zinc finger, ZZ type | 535 | 570 | IPR000433 | GO:0008270 | |
| Arst1g02303 | 988 | CDD | NBR1_like | 641 | 757 | IPR032350 | - | |
| Arst1g02303 | 988 | MobiDBLite | consensus disorder prediction | 879 | 901 | - | - | |
| Arst1g02303 | 988 | MobiDBLite | consensus disorder prediction | 158 | 209 | - | - | |
| Arst1g02303 | 988 | SUPERFAMILY | UBA-like | 947 | 985 | IPR009060 | GO:0005515 | |
| Arst1g02303 | 988 | ProSiteProfiles | Ubiquitin-associated domain (UBA) profile. | 903 | 941 | IPR015940 | - | |
| Arst1g02303 | 988 | SUPERFAMILY | CAD & PB1 domains | 1 | 86 | - | - | |
| Arst1g02303 | 988 | MobiDBLite | consensus disorder prediction | 94 | 209 | - | - | |
| Arst1g02303 | 988 | MobiDBLite | consensus disorder prediction | 375 | 410 | - | - | |
| Arst1g02303 | 988 | Gene3D | - | 2 | 87 | - | - | |
| Arst1g02303 | 988 | SMART | zz_5 | 534 | 575 | IPR000433 | GO:0008270 | |
| Arst1g02303 | 988 | FunFam | protein NBR1 homolog | 946 | 988 | - | - | |
| Arst1g02303 | 988 | ProSiteProfiles | Zinc finger ZZ-type profile. | 535 | 585 | IPR000433 | GO:0008270 | |
| Arst1g02303 | 988 | Pfam | PB1 domain | 6 | 85 | IPR000270 | GO:0005515 | |
| Arst1g02303 | 988 | ProSiteProfiles | PB1 domain profile. | 4 | 88 | IPR000270 | GO:0005515 | |
| Arst1g02303 | 988 | MobiDBLite | consensus disorder prediction | 375 | 473 | - | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Arst1g02303 | K17987 | - | gmx:100778692 | 688.337 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Arst1g02303 | 1 | 66016284 | 66020953 | Arst1g02303 | 1 | 66016284 | 66020953 | ECH |