Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g02289 ATGATGAATCGTCTAAAGACAATTACCCGTTCCCTCCGATTCCTCGACTCGTCTCTCGCCACCCGACACATTGAAACTCGGTCACTCCAACTCGCTCTGAACCAGGTGACTCACTTTTCTCTCAACACTACTACTGCACCTTCACCTTCTTCCCTTTCGAATCATCACTCTTGCAATCACCGCTTTTCAAGCATTCATCACAGATTCTTCTTTTCTTCAAAACCAAGCTCCATATTGGAGCTTGTTTTGACGAGCGATTGGTCCCAATGGTTAGAGCTAGAGTTAGACAAGTGTTGCCTTTTCTTGACCCATGAAACTGTTATTTACGTTTTGAAGAATTTGGATAAAAACCCAATTAAAGCTTCGTGTTTTTTCAACTGGGTCAGCGAGAAACAATGGTTCAGACCAAGTTCCTCAGTGTATAGTTTAGTTGTTAGTATCTTGGCCAAGAAGGAAACTAGGGAACAATTTTGGATAACTCTAGTAGCCATGAAGAAAAATGGATTCTTTCTTGATACTGAAACTTATTTGCCAATTTTAGCTGCTTTTAAGAGGGATAATTTGAAGAGTGATTGTGAGGGTCTTGCCCACTTTTATAAACAAATGATTCGGGAGAATGCAAGGGAGAGTGTTGTCAACAATGTGGTTGGTATTATTACAGCGTCTGAATGGGGTATTGAGGTTATGGAGAAATTGGGGAAGCTTAACATTCATCTGTCTGATAATTTTGTAGCGAGGGTTGTTAAAGAATTTAGAGGTTGTCCTTTGAAAGCGTACCGATTCTTTCGTTGGGTTGGTGAGCAATCTGGTTATGAGCAAAATGCAGTGACTTATAATGCAATTGCAAGAACTCTTGCTAGGGCTAATAGAATTAATGAGTTTTGGGAAGTCATAGAGGAAATGAAGAGTGTAGGTTATGAATTGGATGTTGATACATATACAAAAATATCGAGGCAGCTTCAAAAGAATAGGATGATAGAGGATGCTGTTGAGCTTTATGAGCTTATGATGGATGGATCATGCAAGCCATCGGATCAGGACTGCAGTTCCCTTTTAGTGCACATCTCAGATAGTCATACACCAAATTTAGATTTAATATTCAGAATAATAAATAAATATGAGTTGAACCGGCATACTCTCCCAAAGGCAATCTATGATGGAGTCCATAGGTCTTTGGCAGGTGCTGGGAAATTTGATGAAGCTGAAACTATTGTTGGGAGTATGAGAAATTCTGGATATGAGCCTGATAATGTCACATTTAGTCAAATGGTTTTTGGACTTTGCAAGATGGGGAGGTTAGAAGAAGCGTGTAAAGTGCTCGAAGAGATGGAATCTTGTGGATGCATCCCTGATATCAAGACTTGGACCATCTTGATCCGAGGGCATTGTTCTGCCAATGAAATAGATAAGGCATTACTTTGTTCTGACAAGATGTTTGAAAAGGGATGCAGTCCAGATGCTGCCGTGTTAGGTGCTTTAGTTGACTGTTTTCTTAGCCAACAGAGAATAGAGGATGCATACAACTTTCTTGAAGAGACAGTTAGAAATTTTGTTACATCTCCATGGCAAGGTACATATAAGAAACTGATTGAAGGCCTATTAGGAATTGAGAAATTAGAGGAGGCACTTGACCTTATGTGTTTGATGAGGAAACACAAGTACCCTCCATTCATTGAATCGATTATTCGATACATTTCAAAATCTGGGACCGTGGATGATGCTGTAAAGTTCCTGAAGGCATGGAGTACGGAAAGTCCTCAATCCCATTCCGCCTATGTTCATGTGTTTGAATCGTTCTTCAGAGAAGGTAGAGAGTCTGATGCCAGAGATCTATTGAGTAAGTGTCGCCGCCATATAACTAAACAAAAAGAAATCCGTGCACTTTTTGGTTCAGTAAGGAATTGCAAGGCTGCAGTTGCAGGTAGCACGTAG 1932 0.4027 MMNRLKTITRSLRFLDSSLATRHIETRSLQLALNQVTHFSLNTTTAPSPSSLSNHHSCNHRFSSIHHRFFFSSKPSSILELVLTSDWSQWLELELDKCCLFLTHETVIYVLKNLDKNPIKASCFFNWVSEKQWFRPSSSVYSLVVSILAKKETREQFWITLVAMKKNGFFLDTETYLPILAAFKRDNLKSDCEGLAHFYKQMIRENARESVVNNVVGIITASEWGIEVMEKLGKLNIHLSDNFVARVVKEFRGCPLKAYRFFRWVGEQSGYEQNAVTYNAIARTLARANRINEFWEVIEEMKSVGYELDVDTYTKISRQLQKNRMIEDAVELYELMMDGSCKPSDQDCSSLLVHISDSHTPNLDLIFRIINKYELNRHTLPKAIYDGVHRSLAGAGKFDEAETIVGSMRNSGYEPDNVTFSQMVFGLCKMGRLEEACKVLEEMESCGCIPDIKTWTILIRGHCSANEIDKALLCSDKMFEKGCSPDAAVLGALVDCFLSQQRIEDAYNFLEETVRNFVTSPWQGTYKKLIEGLLGIEKLEEALDLMCLMRKHKYPPFIESIIRYISKSGTVDDAVKFLKAWSTESPQSHSAYVHVFESFFREGRESDARDLLSKCRRHITKQKEIRALFGSVRNCKAAVAGST 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g02289 643 Gene3D Tetratricopeptide repeat domain 364 517 IPR011990 GO:0005515
Arst1g02289 643 Gene3D Tetratricopeptide repeat domain 518 637 IPR011990 GO:0005515
Arst1g02289 643 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 381 415 IPR002885 -
Arst1g02289 643 NCBIfam pentatricopeptide repeat 390 416 IPR002885 -
Arst1g02289 643 NCBIfam pentatricopeptide repeat 320 344 IPR002885 -
Arst1g02289 643 NCBIfam pentatricopeptide repeat 418 452 IPR002885 -
Arst1g02289 643 NCBIfam pentatricopeptide repeat 454 487 IPR002885 -
Arst1g02289 643 NCBIfam pentatricopeptide repeat 276 310 IPR002885 -
Arst1g02289 643 Gene3D Tetratricopeptide repeat domain 243 363 IPR011990 GO:0005515
Arst1g02289 643 Gene3D Tetratricopeptide repeat domain 92 220 IPR011990 GO:0005515
Arst1g02289 643 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 274 308 IPR002885 -
Arst1g02289 643 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 309 343 IPR002885 -
Arst1g02289 643 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 451 485 IPR002885 -
Arst1g02289 643 Pfam PPR repeat 276 305 IPR002885 -
Arst1g02289 643 Pfam PPR repeat 525 552 IPR002885 -
Arst1g02289 643 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 416 450 IPR002885 -
Arst1g02289 643 Pfam PPR repeat 447 472 IPR002885 -
Arst1g02289 643 Pfam PPR repeat 412 444 IPR002885 -
Arst1g02289 643 PANTHER OS01G0970900 PROTEIN 82 631 IPR044578 GO:0008380
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g02289 Arst-Chr1 64154258 64157705 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g02289 94 633 Glycosyltransferase AT1G05670 21.284 7.91e-19 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g02289 - - adu:107465395 795.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g02289 1 64154258 64157705 Arst1g02289 1 64154258 64157705 ECH