Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g02177 ATGGATACTGGAACCTATGGATATCCCAAACAAGGAGTGAAAAAGATTGATCCGTCCTATGATGTTCCAGAAGGAGTGGACATTCGGGGAAGATATGATGAGGAGTTTGCAAAAATCCTCACAAAGGATGCTCTGAAGTTTGTTGCTGAGTTGCAACGTGAGTTCAGGAGCCATATAAGGTATGCTCTGGAGTGCAGAAAAGAGGCAAAGAGGAGGTACAATGAAGGGGCTCTGCCGGGGTTCGATCCGGCGACGAGGTACATAAGGGAAGGGGAGTGGGTGTGTGCACCGGTTCCACCGGCTGTGGCTGATAGGAAGGTAGAGATCACAGGACCTGTGGAGAGGAAGATGGTTATCAATGCTCTCAACTCTGGAGCTAAAGTCTTTATGGCTGATTTTGAAGATGCACTCTCACCAAGCTGGGAGAATCTTATGAGGGGTCAAGTGAACTTGAAGGATGCAGTGGCTGGGACTATAACCTTCAACGACAAAGCCAGGAACAAGGTTTACAAGCTCAACGATCAGACAGCTAAGCTTTTTGTCAGACCAAGAGGTTGGCACCTACCCGAGGCCCATATTTTCATTGATGGTGAACCAGCAACCGGTTGCCTTGTTGATTTCGGCCTCTACTTCTACCACAATCATGCACCGTTCCGCCAGACTCAGGGTGCAGGCTTTGGCCCTTTCTTCTATCTTCCAAAAATGGAGCACTCAAGGGAAGCTAAGATATGGAATAATGTGTTTGAGAGGGCAGAGAAGATGGCAGGCATAGAAAGGGGAAGCATACGGGCCACTGTTCTGATTGAAACACTTCCTGCTGTGTTTCAAATGAACGAAATTCTGTATGAGCTGAGGGACCACTCCGTTGGTCTCAACTGTGGCCGTTGGGATTACATTTTCAGTTATGTCAAGACCTTCCAAGCTCACCCGGATCGGCTGCTCCCGGACAGGGTTCTTGTTGGCATGACTCAGCACTTCATGAAGAGCTACTCTGACCTTCTCATCCGGACGTGTCATAGGCGTGGCGTGCATGCTATGGGAGGCATGGCAGCTCAAATTCCAATTAGAGATGATCCAGCTGCTAATGAGGCAGCACTGGAACTGGTAAGGAAGGACAAACTAAGAGAAGTAAAGGCAGGGCACGACGGAACATGGGCAGCACACCCCGGTCTGATACCAGCCTGCGTGGAGGTTTTTAACAACAACATGGGCAATGCTCCTAATCAGATCAAGGACGCGAAGCGCGATGATGCTGCAAGCATAACTGAAGAAGACCTCTTGCAAATACCTAGAGGTGTACGTACAATGGATGGTCTCCGCTTGAATACACGTGTCGGTATTCAGTATGTGGCGGCATGGCTCACTGGATCTGGTTCAGTTCCTCTTTACAACCTCATGGAAGATGCTGCCACTGCTGAGATTAGCAGGGTGCAGAACTGGCAGTGGATCAAGTATGGAGTGGAGTTGGATGGGGATGGACTCGGAGTAAGAGTGAGCAAGGAGCTCTTCAGCCGAGTGGTTGAGGAAGAGATGGCTAGGATTGAAAGTGAGGTGGGAAAAGATAAATTCAAGAAGGGAATGTATAAGGAGGCTTGCAAGATCTTCAAAAGGCAGTGCACTGCTCCAACACTGGATGATTTTCTGACCCTGGATGCCTACAATTACATAGTCATACAACACCCCAAGGGACCAGCAAAGCTTTGA 1704 0.4894 MDTGTYGYPKQGVKKIDPSYDVPEGVDIRGRYDEEFAKILTKDALKFVAELQREFRSHIRYALECRKEAKRRYNEGALPGFDPATRYIREGEWVCAPVPPAVADRKVEITGPVERKMVINALNSGAKVFMADFEDALSPSWENLMRGQVNLKDAVAGTITFNDKARNKVYKLNDQTAKLFVRPRGWHLPEAHIFIDGEPATGCLVDFGLYFYHNHAPFRQTQGAGFGPFFYLPKMEHSREAKIWNNVFERAEKMAGIERGSIRATVLIETLPAVFQMNEILYELRDHSVGLNCGRWDYIFSYVKTFQAHPDRLLPDRVLVGMTQHFMKSYSDLLIRTCHRRGVHAMGGMAAQIPIRDDPAANEAALELVRKDKLREVKAGHDGTWAAHPGLIPACVEVFNNNMGNAPNQIKDAKRDDAASITEEDLLQIPRGVRTMDGLRLNTRVGIQYVAAWLTGSGSVPLYNLMEDAATAEISRVQNWQWIKYGVELDGDGLGVRVSKELFSRVVEEEMARIESEVGKDKFKKGMYKEACKIFKRQCTAPTLDDFLTLDAYNYIVIQHPKGPAKL 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g02177 567 ProSitePatterns Malate synthase signature. 285 300 IPR019830 GO:0004474|GO:0006097
Arst1g02177 567 Gene3D Malate synthase, domain III 433 557 IPR044856 -
Arst1g02177 567 PIRSF Malate_synth 18 558 IPR006252 GO:0004474|GO:0006097
Arst1g02177 567 SUPERFAMILY Malate synthase G 22 558 IPR011076 GO:0003824
Arst1g02177 567 Gene3D Malate synthase, domain 3 22 432 IPR046363 -
Arst1g02177 567 FunFam Malate synthase 22 432 - -
Arst1g02177 567 PANTHER MALATE SYNTHASE 20 562 IPR006252 GO:0004474|GO:0006097
Arst1g02177 567 NCBIfam malate synthase A 39 556 IPR006252 GO:0004474|GO:0006097
Arst1g02177 567 Pfam Malate synthase 27 557 IPR001465 GO:0004474|GO:0006097
Arst1g02177 567 FunFam Malate synthase 433 557 - -
Arst1g02177 567 CDD malate_synt_A 39 557 IPR006252 GO:0004474|GO:0006097
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g02177 Arst-Chr1 55729615 55735075 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g02177 K01638 - gmx:732628 1051.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g02177 1 55729615 55735075 Arst1g02177 1 55729615 55735075 ECH