Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g02037 ATGGAGTGGTCAGCTTGTACGGATGAATACGAGAAGCTTGTGATTCGGATGAGCACGCCTAGGGTCGTAATTGACAATGCCGTGTGCTCCACAGCTACTATAGTTAAGGTTGATAGCGCCAGAAAACATGGGATTTTGTTGGATGCAATACAAGTGCTCGCTGATTTGGACCTTTTGATTAAGAAGGCTTACATTTCCTCCGACGGAAGGTGGTTCATGGATGTTTTCCATGTTACAGACCAATTAGGAAACAAGTTAACGGATGAGAGCGTATTAAATTATATTGAACAGTCACTTGGGAGTATTCACAATGGTAAAATCAACAGCTCCAATGGTTTCACTGCCCTGGAATTAACAGGCACGGACCGTGTTGGTATTCTTTCGGAGGTGTTCGCTGTACTGGCTGAGCTGCAGTGCGATGTGGTTGAGGCAAAGGTTTGGACTCACAATGGCAGGATTGCCTCCCTGATCTATGTTAGAGACTGTGATTCCAGATCTGCTCTTGAGGACTATCAGAAGATTAATAAGCTTGAAGCACGTTTAAGAAATGTTTTGAAGGGTGACAATGACATTAGGAGTGCAAAAACTTCAATTTCTAATTCTGTCATACACCCGGAAAGAAGGCTACACCAGATGATGTTTGCTGACCGTGACTATGAAAGGAGTCGCATTTTCAAGTTTACCCCTGAGACACCATTTGTATCGGTGCAAAATTGGGCGGAAAAGGGTTACTCTGTTGTGAATGTTCAGTGCAAGGATCGAATTAAGCTAATGTTCGATGTTGTCTGCAATTTGACAGACATGGAATATGTTGTGTTTCATGCAACTATTAACACAAAAGATGATCAAGCTTACCTGGAGTTTTATATAAGGCATAAAGATGGCACTCCAATTAGTTCAGAACCAGAGCGCCAACGTGTGATTCAATGCTTGCAAGCTGCTGTGGAGAGAAGGGCAAATGAGGGTGTTAGGCTAGAGTTATATGCTGAAGACAAGCAGGGCCTTTTAGCAGAGGTTATGAGAACGTTCAGAGAGAATGGGATGAATGTGATTAGAACTGAAATATCTACCGTTGGGGGTGTGGCTGCAAATGTTTTCTATGTAACTGATGCAATGGGTTACCCAGCTGACCCAAAAATAATAGAATCTGTTAGGCAGAAAATTGGGTTAAGCAATTTAAAAGTGAAGGAGTTGCCTTTACTACGTCAACAGAAGACAAAGAGCGAAGGAGATCAACCAGGTGGAGTTGGTGGGGCAGTGTTATTGTCCCTTGGTAGCCTCGTGAGGAGGAATCTCTACAATTTGGGCTTAATCAAATCTTGTTCTTAA 1329 0.4281 MEWSACTDEYEKLVIRMSTPRVVIDNAVCSTATIVKVDSARKHGILLDAIQVLADLDLLIKKAYISSDGRWFMDVFHVTDQLGNKLTDESVLNYIEQSLGSIHNGKINSSNGFTALELTGTDRVGILSEVFAVLAELQCDVVEAKVWTHNGRIASLIYVRDCDSRSALEDYQKINKLEARLRNVLKGDNDIRSAKTSISNSVIHPERRLHQMMFADRDYERSRIFKFTPETPFVSVQNWAEKGYSVVNVQCKDRIKLMFDVVCNLTDMEYVVFHATINTKDDQAYLEFYIRHKDGTPISSEPERQRVIQCLQAAVERRANEGVRLELYAEDKQGLLAEVMRTFRENGMNVIRTEISTVGGVAANVFYVTDAMGYPADPKIIESVRQKIGLSNLKVKELPLLRQQKTKSEGDQPGGVGGAVLLSLGSLVRRNLYNLGLIKSCS 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g02037 442 Pfam ACT domain 116 168 IPR002912 -
Arst1g02037 442 CDD ACT_ACR_3 244 318 - -
Arst1g02037 442 ProSiteProfiles ACT domain profile. 324 403 IPR002912 -
Arst1g02037 442 SUPERFAMILY ACT-like 29 101 IPR045865 -
Arst1g02037 442 SUPERFAMILY ACT-like 320 392 IPR045865 -
Arst1g02037 442 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 1 397 IPR040217 -
Arst1g02037 442 Gene3D - 113 191 - -
Arst1g02037 442 SUPERFAMILY ACT-like 110 184 IPR045865 -
Arst1g02037 442 CDD ACT_ACR_1 32 103 - -
Arst1g02037 442 ProSiteProfiles ACT domain profile. 115 199 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g02037 Arst-Chr1 45482713 45486143 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g02037 - - adu:107487719 856.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g04191 4 120079918 120083662 Arst1g02037 1 45482713 45486143 ECH
Arst1g02037 1 45482713 45486143 Arst1g02037 1 45482713 45486143 ECH