Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01940 ATGGCTTCCAACAAAGCTAGTTCCTCCATTGCTCTTTTTGTCACACTCAATGTTCTCTTCTTTGCCCTTGTCTCCGGATGTGGAAACAAATGCAATAGTCCTGGTTCCAATCCAAATCCTAACCCTAACCCTAGTCCTTCCAGTGGCGGATCATGCCCACGTGACGCGCTCAAACTAGGCGTGTGCGCCAACGTGCTCAACGGTTTGTTGAATGTGACTTTGGGACAGCCACCAGTTACCCCTTGCTGCTCCCTCCTCAACGGCCTCGTTGACCTTGAAGCCGCCGCGTGCCTCTGCACCGCTCTTAGGGCAAATATTTTGGGCATCAATCTCAACCTTCCCATCTCACTTAGCTTGCTTCTTAATGTTTGCTCAAGGAAAGTGCCACATGGCTTCCAATGCAACTAA 408 0.5025 MASNKASSSIALFVTLNVLFFALVSGCGNKCNSPGSNPNPNPNPSPSSGGSCPRDALKLGVCANVLNGLLNVTLGQPPVTPCCSLLNGLVDLEAAACLCTALRANILGINLNLPISLSLLLNVCSRKVPHGFQCN 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01940 135 PANTHER - 7 134 - -
Arst1g01940 135 CDD HPS_like 52 134 IPR027923 -
Arst1g01940 135 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 27 - -
Arst1g01940 135 FunFam pEARLI1-like lipid transfer protein 1 50 135 - -
Arst1g01940 135 Gene3D - 51 135 IPR036312 -
Arst1g01940 135 SMART aai_6 52 134 IPR016140 -
Arst1g01940 135 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 54 134 IPR036312 -
Arst1g01940 135 Pfam Hydrophobic seed protein 52 134 IPR027923 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01940 Arst-Chr1 38368814 38369588 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g01940 43 134 Acyl Lipid Metabolism Gene Families AT4G22490 43.011 7.44e-18 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01940 - - egr:104443705 162.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g01940 1 38368814 38369588 Arst1g01940 1 38368814 38369588 ECH