Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01939 ATGGCTTCCAACAAAGCTAGTTCCTCCATTGCTCTTTTCCTCATAATCAATGTTCTCTTCTTTGCACTTGTCTCCGGATGCGGAAACAAGTGTAATAATAGACCCAGTCCTAATCCAAACCCTAACCCTTCAGGTGGTGGATCATGTCCACGTGACGCGCTCAAACTCGGGGTGTGTGCCAACGTTCTCAACGGTTTGTTGAATGTAACTTTGGGGCAGCCACCGGTGACTCCTTGCTGTTCCCTCCTCAACGGCCTCGTCGATCTTGAAGCCGCCGCTTGCCTCTGCACCGCCCTTAAGGCAAATGTTTTGGGCATCAATCTCAACCTTCCCATCTCCCTCAGCTTGCTCCTCAATGTTTGCTCAAAGAAAGTGCCACATGGCTTCCAATGTAACTAA 399 0.4962 MASNKASSSIALFLIINVLFFALVSGCGNKCNNRPSPNPNPNPSGGGSCPRDALKLGVCANVLNGLLNVTLGQPPVTPCCSLLNGLVDLEAAACLCTALKANVLGINLNLPISLSLLLNVCSKKVPHGFQCN 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01939 132 SMART aai_6 49 131 IPR016140 -
Arst1g01939 132 Gene3D - 48 132 IPR036312 -
Arst1g01939 132 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 51 131 IPR036312 -
Arst1g01939 132 FunFam pEARLI1-like lipid transfer protein 1 47 132 - -
Arst1g01939 132 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 27 - -
Arst1g01939 132 CDD HPS_like 49 131 IPR027923 -
Arst1g01939 132 Pfam Hydrophobic seed protein 49 131 IPR027923 -
Arst1g01939 132 PANTHER - 7 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01939 Arst-Chr1 38355372 38356127 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g01939 36 131 Acyl Lipid Metabolism Gene Families AT4G22490 43.878 9.69e-17 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01939 - - egr:104443705 179.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g01939 1 38355372 38356127 Arst1g01939 1 38355372 38356127 ECH